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IGHV4-55 (immunoglobulin heavy variable 4-55 (pseudogene))

Identity

Other alias4-55P
IGHV455
HGNC (Hugo) IGHV4-55
LocusID (NCBI) 28393
Atlas_Id 78759
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 21494343 and ends at 21742410 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGHV4-55   5653
Cards
Entrez_Gene (NCBI)IGHV4-55  28393  immunoglobulin heavy variable 4-55 (pseudogene)
Aliases4-55P; IGHV455
GeneCards (Weizmann)IGHV4-55
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:21494343-21742410 [Contig_View]  IGHV4-55 [Vega]
TCGA cBioPortalIGHV4-55
AceView (NCBI)IGHV4-55
Genatlas (Paris)IGHV4-55
WikiGenes28393
SOURCE (Princeton)IGHV4-55
Genetics Home Reference (NIH)IGHV4-55
Genomic and cartography
GoldenPath hg38 (UCSC)IGHV4-55  -     chr15:21494343-21742410 -  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGHV4-55  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblIGHV4-55 - 15q11.2 [CytoView hg19]  IGHV4-55 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIIGHV4-55 [Mapview hg19]  IGHV4-55 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF237660
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_001019 NT_187600
Consensus coding sequences : CCDS (NCBI)IGHV4-55
Gene ExpressionIGHV4-55 [ NCBI-GEO ]   IGHV4-55 [ EBI - ARRAY_EXPRESS ]   IGHV4-55 [ SEEK ]   IGHV4-55 [ MEM ]
Gene Expression Viewer (FireBrowse)IGHV4-55 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28393
GTEX Portal (Tissue expression)IGHV4-55
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGHV4-55
DMDM Disease mutations28393
Blocks (Seattle)IGHV4-55
Protein Interaction databases
BioGRIDIGHV4-55
STRING (EMBL)IGHV4-55
ZODIACIGHV4-55
Ontologies - Pathways
Huge Navigator IGHV4-55 [HugePedia]
snp3D : Map Gene to Disease28393
BioCentury BCIQIGHV4-55
ClinGenIGHV4-55
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28393
Chemical/Pharm GKB GenePA35250
Clinical trialIGHV4-55
Miscellaneous
canSAR (ICR)IGHV4-55 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGHV4-55
EVEXIGHV4-55
GoPubMedIGHV4-55
iHOPIGHV4-55
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:51:22 CET 2017

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