Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGHV5-78 (immunoglobulin heavy variable 5-78 (pseudogene))

Identity

Alias_namesimmunoglobulin heavy variable 5-78
immunoglobulin heavy variable 5-78 pseudogene
Other alias5-78P
IGHV578
VH5
HGNC (Hugo) IGHV5-78
LocusID (NCBI) 28387
Atlas_Id 64555
Location 14q32.33  [Link to chromosome band 14q32]
Location_base_pair Starts at 107259326 and ends at 107259739 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGHV5-78   5660
Cards
Entrez_Gene (NCBI)IGHV5-78  28387  immunoglobulin heavy variable 5-78 (pseudogene)
Aliases5-78P; IGHV578; VH5
GeneCards (Weizmann)IGHV5-78
Ensembl hg19 (Hinxton) [Gene_View]  chr14:107259326-107259739 [Contig_View]  IGHV5-78 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:107259326-107259739 [Contig_View]  IGHV5-78 [Vega]
TCGA cBioPortalIGHV5-78
AceView (NCBI)IGHV5-78
Genatlas (Paris)IGHV5-78
WikiGenes28387
SOURCE (Princeton)IGHV5-78
Genetics Home Reference (NIH)IGHV5-78
Genomic and cartography
GoldenPath hg19 (UCSC)IGHV5-78  -     chr14:107259326-107259739 -  14q32.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGHV5-78  -     14q32.33   [Description]    (hg38-Dec_2013)
EnsemblIGHV5-78 - 14q32.33 [CytoView hg19]  IGHV5-78 - 14q32.33 [CytoView hg38]
Mapping of homologs : NCBIIGHV5-78 [Mapview hg19]  IGHV5-78 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF085654 BC002792 X58398 X58399
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_001019 NT_026437 NT_187600 NW_004929393
Consensus coding sequences : CCDS (NCBI)IGHV5-78
Cluster EST : UnigeneHs.81221 [ NCBI ]
CGAP (NCI)Hs.81221
Gene ExpressionIGHV5-78 [ NCBI-GEO ]   IGHV5-78 [ EBI - ARRAY_EXPRESS ]   IGHV5-78 [ SEEK ]   IGHV5-78 [ MEM ]
Gene Expression Viewer (FireBrowse)IGHV5-78 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28387
GTEX Portal (Tissue expression)IGHV5-78
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGHV5-78
DMDM Disease mutations28387
Blocks (Seattle)IGHV5-78
IPIIPI00830051   
Protein Interaction databases
BioGRIDIGHV5-78
STRING (EMBL)IGHV5-78
ZODIACIGHV5-78
Ontologies - Pathways
Huge Navigator IGHV5-78 [HugePedia]
snp3D : Map Gene to Disease28387
BioCentury BCIQIGHV5-78
ClinGenIGHV5-78
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28387
Chemical/Pharm GKB GenePA35257
Clinical trialIGHV5-78
Miscellaneous
canSAR (ICR)IGHV5-78 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGHV5-78
EVEXIGHV5-78
GoPubMedIGHV5-78
iHOPIGHV5-78
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:39 CET 2017

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