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IGKV2-24 (immunoglobulin kappa variable 2-24)

Identity

Other aliasA23
IGKV224
HGNC (Hugo) IGKV2-24
LocusID (NCBI) 28923
Atlas_Id 64562
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 88857166 and ends at 89177144 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGKV2-24   5781
Cards
Entrez_Gene (NCBI)IGKV2-24  28923  immunoglobulin kappa variable 2-24
AliasesA23; IGKV224
GeneCards (Weizmann)IGKV2-24
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:88857166-89177144 [Contig_View]  IGKV2-24 [Vega]
TCGA cBioPortalIGKV2-24
AceView (NCBI)IGKV2-24
Genatlas (Paris)IGKV2-24
WikiGenes28923
SOURCE (Princeton)IGKV2-24
Genetics Home Reference (NIH)IGKV2-24
Genomic and cartography
GoldenPath hg38 (UCSC)IGKV2-24  -     chr2:88857166-89177144 -  2p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGKV2-24  -     2p11.2   [Description]    (hg19-Feb_2009)
EnsemblIGKV2-24 - 2p11.2 [CytoView hg19]  IGKV2-24 - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIIGKV2-24 [Mapview hg19]  IGKV2-24 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC063599
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGKV2-24
Cluster EST : UnigeneHs.449609 [ NCBI ]
CGAP (NCI)Hs.449609
Gene ExpressionIGKV2-24 [ NCBI-GEO ]   IGKV2-24 [ EBI - ARRAY_EXPRESS ]   IGKV2-24 [ SEEK ]   IGKV2-24 [ MEM ]
Gene Expression Viewer (FireBrowse)IGKV2-24 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)28923
GTEX Portal (Tissue expression)IGKV2-24
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A0C4DH68   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A0C4DH68  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A0C4DH68
Splice isoforms : SwissVarA0A0C4DH68
PhosPhoSitePlusA0A0C4DH68
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IGv (SM00406)  
Conserved Domain (NCBI)IGKV2-24
DMDM Disease mutations28923
Blocks (Seattle)IGKV2-24
SuperfamilyA0A0C4DH68
Peptide AtlasA0A0C4DH68
Protein Interaction databases
DIP (DOE-UCLA)A0A0C4DH68
IntAct (EBI)A0A0C4DH68
BioGRIDIGKV2-24
STRING (EMBL)IGKV2-24
ZODIACIGKV2-24
Ontologies - Pathways
QuickGOA0A0C4DH68
Ontology : AmiGOadaptive immune response  immunoglobulin production  antigen binding  extracellular space  plasma membrane  immune response  
Ontology : EGO-EBIadaptive immune response  immunoglobulin production  antigen binding  extracellular space  plasma membrane  immune response  
NDEx NetworkIGKV2-24
Atlas of Cancer Signalling NetworkIGKV2-24
Wikipedia pathwaysIGKV2-24
Orthology - Evolution
OrthoDB28923
Phylogenetic Trees/Animal Genes : TreeFamIGKV2-24
HOVERGENA0A0C4DH68
HOGENOMA0A0C4DH68
Homologs : HomoloGeneIGKV2-24
Homology/Alignments : Family Browser (UCSC)IGKV2-24
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGKV2-24 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGKV2-24
dbVarIGKV2-24
ClinVarIGKV2-24
1000_GenomesIGKV2-24 
Exome Variant ServerIGKV2-24
ExAC (Exome Aggregation Consortium)IGKV2-24 (select the gene name)
Genetic variants : HAPMAP28923
Genomic Variants (DGV)IGKV2-24 [DGVbeta]
DECIPHERIGKV2-24 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIGKV2-24 
Mutations
ICGC Data PortalIGKV2-24 
TCGA Data PortalIGKV2-24 
Broad Tumor PortalIGKV2-24
OASIS PortalIGKV2-24 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIGKV2-24
BioMutasearch IGKV2-24
DgiDB (Drug Gene Interaction Database)IGKV2-24
DoCM (Curated mutations)IGKV2-24 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGKV2-24 (select a term)
intoGenIGKV2-24
Cancer3DIGKV2-24(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIGKV2-24
Genetic Testing Registry IGKV2-24
NextProtA0A0C4DH68 [Medical]
TSGene28923
GENETestsIGKV2-24
Target ValidationIGKV2-24
Huge Navigator IGKV2-24 [HugePedia]
snp3D : Map Gene to Disease28923
BioCentury BCIQIGKV2-24
ClinGenIGKV2-24
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28923
Chemical/Pharm GKB GenePA35361
Clinical trialIGKV2-24
Miscellaneous
canSAR (ICR)IGKV2-24 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGKV2-24
EVEXIGKV2-24
GoPubMedIGKV2-24
iHOPIGKV2-24
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:17 CEST 2017

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