Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGKV3D-15 (immunoglobulin kappa variable 3D-15 (gene/pseudogene))

Identity

Alias_namesimmunoglobulin kappa variable 3D-15
Other aliasIGKV3D15
L16
L16a
L16b
L16c
HGNC (Hugo) IGKV3D-15
LocusID (NCBI) 28875
Atlas_Id 64564
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 89160732 and ends at 89384957 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGKV3D-15   5824
Cards
Entrez_Gene (NCBI)IGKV3D-15  28875  immunoglobulin kappa variable 3D-15 (gene/pseudogene)
AliasesIGKV3D15; L16; L16a; L16b; 
L16c
GeneCards (Weizmann)IGKV3D-15
Ensembl hg19 (Hinxton) [Gene_View]  chr2:89160732-89384957 [Contig_View]  IGKV3D-15 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:89160732-89384957 [Contig_View]  IGKV3D-15 [Vega]
TCGA cBioPortalIGKV3D-15
AceView (NCBI)IGKV3D-15
Genatlas (Paris)IGKV3D-15
WikiGenes28875
SOURCE (Princeton)IGKV3D-15
Genetics Home Reference (NIH)IGKV3D-15
Genomic and cartography
GoldenPath hg19 (UCSC)IGKV3D-15  -     chr2:89160732-89384957 -  2p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGKV3D-15  -     2p11.2   [Description]    (hg38-Dec_2013)
EnsemblIGKV3D-15 - 2p11.2 [CytoView hg19]  IGKV3D-15 - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIIGKV3D-15 [Mapview hg19]  IGKV3D-15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF035031
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NG_000833 NT_187177 NW_004929301
Consensus coding sequences : CCDS (NCBI)IGKV3D-15
Cluster EST : UnigeneHs.449609 [ NCBI ]
CGAP (NCI)Hs.449609
Gene ExpressionIGKV3D-15 [ NCBI-GEO ]   IGKV3D-15 [ EBI - ARRAY_EXPRESS ]   IGKV3D-15 [ SEEK ]   IGKV3D-15 [ MEM ]
Gene Expression Viewer (FireBrowse)IGKV3D-15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)28875
GTEX Portal (Tissue expression)IGKV3D-15
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGKV3D-15
DMDM Disease mutations28875
Blocks (Seattle)IGKV3D-15
IPIIPI01026045   
Protein Interaction databases
BioGRIDIGKV3D-15
STRING (EMBL)IGKV3D-15
ZODIACIGKV3D-15
Ontologies - Pathways
Huge Navigator IGKV3D-15 [HugePedia]
snp3D : Map Gene to Disease28875
BioCentury BCIQIGKV3D-15
ClinGenIGKV3D-15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28875
Chemical/Pharm GKB GenePA35399
Clinical trialIGKV3D-15
Miscellaneous
canSAR (ICR)IGKV3D-15 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGKV3D-15
EVEXIGKV3D-15
GoPubMedIGKV3D-15
iHOPIGKV3D-15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:41 CET 2017

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