Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGKV@ (immunoglobulin kappa variable cluster)

Identity

Other aliasIGKV
IGKV1
IGKV1@
IGKV2
IGKV2@
IGKV3
IGKV3@
HGNC (Hugo) -
LocusID (NCBI) 3519
Atlas_Id 53417
Location 2p11.2  [Link to chromosome band 2p11]
Location_base_pair Starts at 89160739 and ends at 89442329 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)IGKV@  3519  immunoglobulin kappa variable cluster
AliasesIGKV; IGKV1; IGKV1@; IGKV2; 
IGKV2@; IGKV3; IGKV3@
GeneCards (Weizmann)IGKV@
Ensembl hg19 (Hinxton) [Gene_View]  chr2:89160739-89442329 [Contig_View]  IGKV@ [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:89160739-89442329 [Contig_View]  IGKV@ [Vega]
TCGA cBioPortalIGKV@
AceView (NCBI)IGKV@
Genatlas (Paris)IGKV@
WikiGenes3519
SOURCE (Princeton)IGKV@
Genetics Home Reference (NIH)IGKV@
Genomic and cartography
GoldenPath hg19 (UCSC)IGKV@  -     chr2:89160739-89442329 -  2p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IGKV@  -     2p11.2   [Description]    (hg38-Dec_2013)
EnsemblIGKV@ - 2p11.2 [CytoView hg19]  IGKV@ - 2p11.2 [CytoView hg38]
Mapping of homologs : NCBIIGKV@ [Mapview hg19]  IGKV@ [Mapview hg38]
OMIM146980   
Gene and transcription
Genbank (Entrez)AF103379 AF103383 AF103696
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGKV@
Cluster EST : UnigeneHs.535669 [ NCBI ]
CGAP (NCI)Hs.535669
Gene ExpressionIGKV@ [ NCBI-GEO ]   IGKV@ [ EBI - ARRAY_EXPRESS ]   IGKV@ [ SEEK ]   IGKV@ [ MEM ]
Gene Expression Viewer (FireBrowse)IGKV@ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)3519
GTEX Portal (Tissue expression)IGKV@
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IGKV@
DMDM Disease mutations3519
Blocks (Seattle)IGKV@
Protein Interaction databases
BioGRIDIGKV@
STRING (EMBL)IGKV@
ZODIACIGKV@
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease3519
BioCentury BCIQIGKV@
ClinGenIGKV@
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3519
Chemical/Pharm GKB GenePA35312
Clinical trialIGKV@
Miscellaneous
canSAR (ICR)IGKV@ (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGKV@
EVEXIGKV@
GoPubMedIGKV@
iHOPIGKV@
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:10:29 CET 2017

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