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IGLV1-44 (immunoglobulin lambda variable 1-44)

Identity

Other aliasIGLV144
V1-16
HGNC (Hugo) IGLV1-44
LocusID (NCBI) 28823
Atlas_Id 64569
Location 22_KI270875v1_alt  [Link to chromosome band 22]
Location_base_pair Starts at 7385 and ends at 7892 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IGLV1-44 (22q11.22) / IGLL5 (22q11.22)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGLV1-44   5879
Cards
Entrez_Gene (NCBI)IGLV1-44  28823  immunoglobulin lambda variable 1-44
AliasesIGLV144; V1-16
GeneCards (Weizmann)IGLV1-44
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22_KI270875v1_alt:7385-7892 [Contig_View]  IGLV1-44 [Vega]
TCGA cBioPortalIGLV1-44
AceView (NCBI)IGLV1-44
Genatlas (Paris)IGLV1-44
WikiGenes28823
SOURCE (Princeton)IGLV1-44
Genetics Home Reference (NIH)IGLV1-44
Genomic and cartography
GoldenPath hg38 (UCSC)IGLV1-44  -     chr22_KI270875v1_alt:7385-7892 +  22_KI270875v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGLV1-44  -     22_KI270875v1_alt   [Description]    (hg19-Feb_2009)
EnsemblIGLV1-44 - 22_KI270875v1_alt [CytoView hg19]  IGLV1-44 - 22_KI270875v1_alt [CytoView hg38]
Mapping of homologs : NCBIIGLV1-44 [Mapview hg19]  IGLV1-44 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030984 U96394
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGLV1-44
Cluster EST : UnigeneHs.655198 [ NCBI ]
CGAP (NCI)Hs.655198
Gene ExpressionIGLV1-44 [ NCBI-GEO ]   IGLV1-44 [ EBI - ARRAY_EXPRESS ]   IGLV1-44 [ SEEK ]   IGLV1-44 [ MEM ]
Gene Expression Viewer (FireBrowse)IGLV1-44 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)28823
GTEX Portal (Tissue expression)IGLV1-44
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01699   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP01699  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP01699
Splice isoforms : SwissVarP01699
PhosPhoSitePlusP01699
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  IGv (SM00406)  
Conserved Domain (NCBI)IGLV1-44
DMDM Disease mutations28823
Blocks (Seattle)IGLV1-44
SuperfamilyP01699
Peptide AtlasP01699
IPIIPI00887169   IPI00956602   IPI00969620   
Protein Interaction databases
DIP (DOE-UCLA)P01699
IntAct (EBI)P01699
BioGRIDIGLV1-44
STRING (EMBL)IGLV1-44
ZODIACIGLV1-44
Ontologies - Pathways
QuickGOP01699
Ontology : AmiGOantigen binding  serine-type endopeptidase activity  extracellular region  extracellular region  plasma membrane  proteolysis  receptor-mediated endocytosis  immune response  complement activation  complement activation, classical pathway  Fc-epsilon receptor signaling pathway  Fc-gamma receptor signaling pathway involved in phagocytosis  regulation of immune response  leukocyte migration  
Ontology : EGO-EBIantigen binding  serine-type endopeptidase activity  extracellular region  extracellular region  plasma membrane  proteolysis  receptor-mediated endocytosis  immune response  complement activation  complement activation, classical pathway  Fc-epsilon receptor signaling pathway  Fc-gamma receptor signaling pathway involved in phagocytosis  regulation of immune response  leukocyte migration  
NDEx NetworkIGLV1-44
Atlas of Cancer Signalling NetworkIGLV1-44
Wikipedia pathwaysIGLV1-44
Orthology - Evolution
OrthoDB28823
Phylogenetic Trees/Animal Genes : TreeFamIGLV1-44
HOVERGENP01699
HOGENOMP01699
Homologs : HomoloGeneIGLV1-44
Homology/Alignments : Family Browser (UCSC)IGLV1-44
Gene fusions - Rearrangements
Tumor Fusion PortalIGLV1-44
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGLV1-44 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGLV1-44
dbVarIGLV1-44
ClinVarIGLV1-44
1000_GenomesIGLV1-44 
Exome Variant ServerIGLV1-44
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP28823
Genomic Variants (DGV)IGLV1-44 [DGVbeta]
DECIPHERIGLV1-44 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIGLV1-44 
Mutations
ICGC Data PortalIGLV1-44 
TCGA Data PortalIGLV1-44 
Broad Tumor PortalIGLV1-44
OASIS PortalIGLV1-44 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIGLV1-44
BioMutasearch IGLV1-44
DgiDB (Drug Gene Interaction Database)IGLV1-44
DoCM (Curated mutations)IGLV1-44 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGLV1-44 (select a term)
intoGenIGLV1-44
Cancer3DIGLV1-44(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETIGLV1-44
MedgenIGLV1-44
Genetic Testing Registry IGLV1-44
NextProtP01699 [Medical]
TSGene28823
GENETestsIGLV1-44
Target ValidationIGLV1-44
Huge Navigator IGLV1-44 [HugePedia]
snp3D : Map Gene to Disease28823
BioCentury BCIQIGLV1-44
ClinGenIGLV1-44
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28823
Chemical/Pharm GKB GenePA35422
Clinical trialIGLV1-44
Miscellaneous
canSAR (ICR)IGLV1-44 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGLV1-44
EVEXIGLV1-44
GoPubMedIGLV1-44
iHOPIGLV1-44
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:43:45 CET 2017

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