Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IGLV3-10 (immunoglobulin lambda variable 3-10)

Identity

Other aliasIGLV310
V2-7
HGNC (Hugo) IGLV3-10
LocusID (NCBI) 28803
Atlas_Id 53010
Location 22q11.22  [Link to chromosome band 22q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGLV3-10   5897
Cards
Entrez_Gene (NCBI)IGLV3-10  28803  immunoglobulin lambda variable 3-10
AliasesIGLV310; V2-7
GeneCards (Weizmann)IGLV3-10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  IGLV3-10 [Vega]
TCGA cBioPortalIGLV3-10
AceView (NCBI)IGLV3-10
Genatlas (Paris)IGLV3-10
WikiGenes28803
SOURCE (Princeton)IGLV3-10
Genetics Home Reference (NIH)IGLV3-10
Genomic and cartography
GoldenPath hg38 (UCSC)IGLV3-10  -  
GoldenPath hg19 (UCSC)IGLV3-10  -  
EnsemblIGLV3-10 - [CytoView hg19]  IGLV3-10 - [CytoView hg38]
Mapping of homologs : NCBIIGLV3-10 [Mapview hg19]  IGLV3-10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGLV3-10
Gene ExpressionIGLV3-10 [ NCBI-GEO ]   IGLV3-10 [ EBI - ARRAY_EXPRESS ]   IGLV3-10 [ SEEK ]   IGLV3-10 [ MEM ]
Gene Expression Viewer (FireBrowse)IGLV3-10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)28803
GTEX Portal (Tissue expression)IGLV3-10
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A075B6K4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A075B6K4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A075B6K4
Splice isoforms : SwissVarA0A075B6K4
PhosPhoSitePlusA0A075B6K4
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  IGv (SM00406)  
Conserved Domain (NCBI)IGLV3-10
DMDM Disease mutations28803
Blocks (Seattle)IGLV3-10
SuperfamilyA0A075B6K4
Peptide AtlasA0A075B6K4
Protein Interaction databases
DIP (DOE-UCLA)A0A075B6K4
IntAct (EBI)A0A075B6K4
BioGRIDIGLV3-10
STRING (EMBL)IGLV3-10
ZODIACIGLV3-10
Ontologies - Pathways
QuickGOA0A075B6K4
Ontology : AmiGOadaptive immune response  immunoglobulin production  antigen binding  extracellular space  plasma membrane  immune response  
Ontology : EGO-EBIadaptive immune response  immunoglobulin production  antigen binding  extracellular space  plasma membrane  immune response  
NDEx NetworkIGLV3-10
Atlas of Cancer Signalling NetworkIGLV3-10
Wikipedia pathwaysIGLV3-10
Orthology - Evolution
OrthoDB28803
Phylogenetic Trees/Animal Genes : TreeFamIGLV3-10
HOVERGENA0A075B6K4
HOGENOMA0A075B6K4
Homologs : HomoloGeneIGLV3-10
Homology/Alignments : Family Browser (UCSC)IGLV3-10
Gene fusions - Rearrangements
Tumor Fusion PortalIGLV3-10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGLV3-10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGLV3-10
dbVarIGLV3-10
ClinVarIGLV3-10
1000_GenomesIGLV3-10 
Exome Variant ServerIGLV3-10
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP28803
Genomic Variants (DGV)IGLV3-10 [DGVbeta]
DECIPHERIGLV3-10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIGLV3-10 
Mutations
ICGC Data PortalIGLV3-10 
TCGA Data PortalIGLV3-10 
Broad Tumor PortalIGLV3-10
OASIS PortalIGLV3-10 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIGLV3-10
BioMutasearch IGLV3-10
DgiDB (Drug Gene Interaction Database)IGLV3-10
DoCM (Curated mutations)IGLV3-10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGLV3-10 (select a term)
intoGenIGLV3-10
Cancer3DIGLV3-10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETIGLV3-10
MedgenIGLV3-10
Genetic Testing Registry IGLV3-10
NextProtA0A075B6K4 [Medical]
TSGene28803
GENETestsIGLV3-10
Target ValidationIGLV3-10
Huge Navigator IGLV3-10 [HugePedia]
snp3D : Map Gene to Disease28803
BioCentury BCIQIGLV3-10
ClinGenIGLV3-10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28803
Chemical/Pharm GKB GenePA35440
Clinical trialIGLV3-10
Miscellaneous
canSAR (ICR)IGLV3-10 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGLV3-10
EVEXIGLV3-10
GoPubMedIGLV3-10
iHOPIGLV3-10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:17:31 CET 2017

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