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IGLV3-19 (immunoglobulin lambda variable 3-19)

Identity

Other aliasIGLV319
V2-13
VL3L
HGNC (Hugo) IGLV3-19
LocusID (NCBI) 28797
Atlas_Id 64570
Location 22q11.22  [Link to chromosome band 22q11]
Location_base_pair Starts at 22720872 and ends at 22899657 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)IGLV3-19   5903
Cards
Entrez_Gene (NCBI)IGLV3-19  28797  immunoglobulin lambda variable 3-19
AliasesIGLV319; V2-13; VL3L
GeneCards (Weizmann)IGLV3-19
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:22720872-22899657 [Contig_View]  IGLV3-19 [Vega]
TCGA cBioPortalIGLV3-19
AceView (NCBI)IGLV3-19
Genatlas (Paris)IGLV3-19
WikiGenes28797
SOURCE (Princeton)IGLV3-19
Genetics Home Reference (NIH)IGLV3-19
Genomic and cartography
GoldenPath hg38 (UCSC)IGLV3-19  -     chr22:22720872-22899657 +  22q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IGLV3-19  -     22q11.22   [Description]    (hg19-Feb_2009)
EnsemblIGLV3-19 - 22q11.22 [CytoView hg19]  IGLV3-19 - 22q11.22 [CytoView hg38]
Mapping of homologs : NCBIIGLV3-19 [Mapview hg19]  IGLV3-19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)L43092
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IGLV3-19
Cluster EST : UnigeneHs.728758 [ NCBI ]
CGAP (NCI)Hs.728758
Gene ExpressionIGLV3-19 [ NCBI-GEO ]   IGLV3-19 [ EBI - ARRAY_EXPRESS ]   IGLV3-19 [ SEEK ]   IGLV3-19 [ MEM ]
Gene Expression Viewer (FireBrowse)IGLV3-19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)28797
GTEX Portal (Tissue expression)IGLV3-19
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01714   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP01714  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP01714
Splice isoforms : SwissVarP01714
PhosPhoSitePlusP01714
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    Ig_V-set   
Domain families : Pfam (Sanger)V-set (PF07686)   
Domain families : Pfam (NCBI)pfam07686   
Domain families : Smart (EMBL)IG (SM00409)  IGv (SM00406)  
Conserved Domain (NCBI)IGLV3-19
DMDM Disease mutations28797
Blocks (Seattle)IGLV3-19
SuperfamilyP01714
Peptide AtlasP01714
IPIIPI00829640   
Protein Interaction databases
DIP (DOE-UCLA)P01714
IntAct (EBI)P01714
BioGRIDIGLV3-19
STRING (EMBL)IGLV3-19
ZODIACIGLV3-19
Ontologies - Pathways
QuickGOP01714
Ontology : AmiGOantigen binding  serine-type endopeptidase activity  extracellular region  extracellular region  plasma membrane  proteolysis  receptor-mediated endocytosis  immune response  complement activation  complement activation, classical pathway  Fc-epsilon receptor signaling pathway  Fc-gamma receptor signaling pathway involved in phagocytosis  regulation of immune response  leukocyte migration  extracellular exosome  
Ontology : EGO-EBIantigen binding  serine-type endopeptidase activity  extracellular region  extracellular region  plasma membrane  proteolysis  receptor-mediated endocytosis  immune response  complement activation  complement activation, classical pathway  Fc-epsilon receptor signaling pathway  Fc-gamma receptor signaling pathway involved in phagocytosis  regulation of immune response  leukocyte migration  extracellular exosome  
NDEx NetworkIGLV3-19
Atlas of Cancer Signalling NetworkIGLV3-19
Wikipedia pathwaysIGLV3-19
Orthology - Evolution
OrthoDB28797
Phylogenetic Trees/Animal Genes : TreeFamIGLV3-19
HOVERGENP01714
HOGENOMP01714
Homologs : HomoloGeneIGLV3-19
Homology/Alignments : Family Browser (UCSC)IGLV3-19
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIGLV3-19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IGLV3-19
dbVarIGLV3-19
ClinVarIGLV3-19
1000_GenomesIGLV3-19 
Exome Variant ServerIGLV3-19
ExAC (Exome Aggregation Consortium)IGLV3-19 (select the gene name)
Genetic variants : HAPMAP28797
Genomic Variants (DGV)IGLV3-19 [DGVbeta]
DECIPHERIGLV3-19 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIGLV3-19 
Mutations
ICGC Data PortalIGLV3-19 
TCGA Data PortalIGLV3-19 
Broad Tumor PortalIGLV3-19
OASIS PortalIGLV3-19 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIGLV3-19
BioMutasearch IGLV3-19
DgiDB (Drug Gene Interaction Database)IGLV3-19
DoCM (Curated mutations)IGLV3-19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IGLV3-19 (select a term)
intoGenIGLV3-19
Cancer3DIGLV3-19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIGLV3-19
Genetic Testing Registry IGLV3-19
NextProtP01714 [Medical]
TSGene28797
GENETestsIGLV3-19
Huge Navigator IGLV3-19 [HugePedia]
snp3D : Map Gene to Disease28797
BioCentury BCIQIGLV3-19
ClinGenIGLV3-19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD28797
Chemical/Pharm GKB GenePA35446
Clinical trialIGLV3-19
Miscellaneous
canSAR (ICR)IGLV3-19 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIGLV3-19
EVEXIGLV3-19
GoPubMedIGLV3-19
iHOPIGLV3-19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:16:44 CEST 2017

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