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IKBIP (IKBKB interacting protein)

Identity

Alias_symbol (synonym)FLJ31051
IKIP
Other alias
HGNC (Hugo) IKBIP
LocusID (NCBI) 121457
Atlas_Id 46800
Location 12q23.1  [Link to chromosome band 12q23]
Location_base_pair Starts at 98624252 and ends at 98645051 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IKBIP (12q23.1) / ANKS1B (12q23.1)IKBIP 12q23.1 / ANKS1B 12q23.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IKBIP   26430
Cards
Entrez_Gene (NCBI)IKBIP  121457  IKBKB interacting protein
AliasesIKIP
GeneCards (Weizmann)IKBIP
Ensembl hg19 (Hinxton)ENSG00000166130 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166130 [Gene_View]  chr12:98624252-98645051 [Contig_View]  IKBIP [Vega]
ICGC DataPortalENSG00000166130
TCGA cBioPortalIKBIP
AceView (NCBI)IKBIP
Genatlas (Paris)IKBIP
WikiGenes121457
SOURCE (Princeton)IKBIP
Genetics Home Reference (NIH)IKBIP
Genomic and cartography
GoldenPath hg38 (UCSC)IKBIP  -     chr12:98624252-98645051 -  12q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IKBIP  -     12q23.1   [Description]    (hg19-Feb_2009)
EnsemblIKBIP - 12q23.1 [CytoView hg19]  IKBIP - 12q23.1 [CytoView hg38]
Mapping of homologs : NCBIIKBIP [Mapview hg19]  IKBIP [Mapview hg38]
OMIM609861   
Gene and transcription
Genbank (Entrez)AJ539425 AJ539426 AJ539427 AJ539427 AK055613
RefSeq transcript (Entrez)NM_153687 NM_201612 NM_201613
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IKBIP
Cluster EST : UnigeneHs.252543 [ NCBI ]
CGAP (NCI)Hs.252543
Alternative Splicing GalleryENSG00000166130
Gene ExpressionIKBIP [ NCBI-GEO ]   IKBIP [ EBI - ARRAY_EXPRESS ]   IKBIP [ SEEK ]   IKBIP [ MEM ]
Gene Expression Viewer (FireBrowse)IKBIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)121457
GTEX Portal (Tissue expression)IKBIP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ70UQ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ70UQ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ70UQ0
Splice isoforms : SwissVarQ70UQ0
PhosPhoSitePlusQ70UQ0
Domains : Interpro (EBI)Inh_kappa-B_kinase-int   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IKBIP
DMDM Disease mutations121457
Blocks (Seattle)IKBIP
SuperfamilyQ70UQ0
Human Protein AtlasENSG00000166130
Peptide AtlasQ70UQ0
HPRD08092
IPIIPI00797136   IPI00896464   IPI00401792   IPI00043598   
Protein Interaction databases
DIP (DOE-UCLA)Q70UQ0
IntAct (EBI)Q70UQ0
FunCoupENSG00000166130
BioGRIDIKBIP
STRING (EMBL)IKBIP
ZODIACIKBIP
Ontologies - Pathways
QuickGOQ70UQ0
Ontology : AmiGOprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  response to X-ray  membrane  integral component of membrane  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum  endoplasmic reticulum membrane  response to X-ray  membrane  integral component of membrane  
NDEx NetworkIKBIP
Atlas of Cancer Signalling NetworkIKBIP
Wikipedia pathwaysIKBIP
Orthology - Evolution
OrthoDB121457
GeneTree (enSembl)ENSG00000166130
Phylogenetic Trees/Animal Genes : TreeFamIKBIP
HOVERGENQ70UQ0
HOGENOMQ70UQ0
Homologs : HomoloGeneIKBIP
Homology/Alignments : Family Browser (UCSC)IKBIP
Gene fusions - Rearrangements
Fusion : MitelmanIKBIP/ANKS1B [12q23.1/12q23.1]  
Fusion: TCGAIKBIP 12q23.1 ANKS1B 12q23.1 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIKBIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IKBIP
dbVarIKBIP
ClinVarIKBIP
1000_GenomesIKBIP 
Exome Variant ServerIKBIP
ExAC (Exome Aggregation Consortium)IKBIP (select the gene name)
Genetic variants : HAPMAP121457
Genomic Variants (DGV)IKBIP [DGVbeta]
DECIPHERIKBIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIKBIP 
Mutations
ICGC Data PortalIKBIP 
TCGA Data PortalIKBIP 
Broad Tumor PortalIKBIP
OASIS PortalIKBIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIKBIP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIKBIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IKBIP
DgiDB (Drug Gene Interaction Database)IKBIP
DoCM (Curated mutations)IKBIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IKBIP (select a term)
intoGenIKBIP
Cancer3DIKBIP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609861   
Orphanet
MedgenIKBIP
Genetic Testing Registry IKBIP
NextProtQ70UQ0 [Medical]
TSGene121457
GENETestsIKBIP
Huge Navigator IKBIP [HugePedia]
snp3D : Map Gene to Disease121457
BioCentury BCIQIKBIP
ClinGenIKBIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD121457
Chemical/Pharm GKB GenePA165512948
Clinical trialIKBIP
Miscellaneous
canSAR (ICR)IKBIP (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIKBIP
EVEXIKBIP
GoPubMedIKBIP
iHOPIKBIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:20:13 CEST 2017

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