Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

IL11RA (interleukin 11 receptor subunit alpha)

Identity

Alias_namesinterleukin 11 receptor
Other aliasCRSDA
HGNC (Hugo) IL11RA
LocusID (NCBI) 3590
Atlas_Id 45838
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 34652182 and ends at 34661898 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GALT (9p13.3) / IL11RA (9p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL11RA   5967
Cards
Entrez_Gene (NCBI)IL11RA  3590  interleukin 11 receptor subunit alpha
AliasesCRSDA
GeneCards (Weizmann)IL11RA
Ensembl hg19 (Hinxton)ENSG00000137070 [Gene_View]  chr9:34652182-34661898 [Contig_View]  IL11RA [Vega]
Ensembl hg38 (Hinxton)ENSG00000137070 [Gene_View]  chr9:34652182-34661898 [Contig_View]  IL11RA [Vega]
ICGC DataPortalENSG00000137070
TCGA cBioPortalIL11RA
AceView (NCBI)IL11RA
Genatlas (Paris)IL11RA
WikiGenes3590
SOURCE (Princeton)IL11RA
Genetics Home Reference (NIH)IL11RA
Genomic and cartography
GoldenPath hg19 (UCSC)IL11RA  -     chr9:34652182-34661898 +  9p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IL11RA  -     9p13.3   [Description]    (hg38-Dec_2013)
EnsemblIL11RA - 9p13.3 [CytoView hg19]  IL11RA - 9p13.3 [CytoView hg38]
Mapping of homologs : NCBIIL11RA [Mapview hg19]  IL11RA [Mapview hg38]
OMIM600939   614188   
Gene and transcription
Genbank (Entrez)AI377039 AK075530 AK094689 AK292073 BC003110
RefSeq transcript (Entrez)NM_001142784 NM_004512 NM_147162
RefSeq genomic (Entrez)NC_000009 NC_018920 NG_028966 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)IL11RA
Cluster EST : UnigeneHs.591088 [ NCBI ]
CGAP (NCI)Hs.591088
Alternative Splicing GalleryENSG00000137070
Gene ExpressionIL11RA [ NCBI-GEO ]   IL11RA [ EBI - ARRAY_EXPRESS ]   IL11RA [ SEEK ]   IL11RA [ MEM ]
Gene Expression Viewer (FireBrowse)IL11RA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3590
GTEX Portal (Tissue expression)IL11RA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14626   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14626  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14626
Splice isoforms : SwissVarQ14626
PhosPhoSitePlusQ14626
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    HEMATOPO_REC_L_F3 (PS01354)    IG_LIKE (PS50835)   
Domains : Interpro (EBI)FN3_dom    Hematopoietin_rcpt_L_F3_CS    Ig-like_dom    Ig-like_fold    Ig_sub   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)FN3 (SM00060)  IG (SM00409)  
Conserved Domain (NCBI)IL11RA
DMDM Disease mutations3590
Blocks (Seattle)IL11RA
SuperfamilyQ14626
Human Protein AtlasENSG00000137070
Peptide AtlasQ14626
HPRD02965
IPIIPI00184319   IPI00375713   IPI01025958   IPI01025723   IPI01026366   IPI01025825   IPI01026125   IPI01026497   IPI00978416   
Protein Interaction databases
DIP (DOE-UCLA)Q14626
IntAct (EBI)Q14626
FunCoupENSG00000137070
BioGRIDIL11RA
STRING (EMBL)IL11RA
ZODIACIL11RA
Ontologies - Pathways
QuickGOQ14626
Ontology : AmiGOsignal transducer activity  transmembrane signaling receptor activity  cytokine receptor activity  plasma membrane  integral component of plasma membrane  signal transduction  embryo implantation  cytokine-mediated signaling pathway  developmental process  head development  
Ontology : EGO-EBIsignal transducer activity  transmembrane signaling receptor activity  cytokine receptor activity  plasma membrane  integral component of plasma membrane  signal transduction  embryo implantation  cytokine-mediated signaling pathway  developmental process  head development  
Pathways : KEGGCytokine-cytokine receptor interaction    Jak-STAT signaling pathway    Hematopoietic cell lineage   
NDEx NetworkIL11RA
Atlas of Cancer Signalling NetworkIL11RA
Wikipedia pathwaysIL11RA
Orthology - Evolution
OrthoDB3590
GeneTree (enSembl)ENSG00000137070
Phylogenetic Trees/Animal Genes : TreeFamIL11RA
HOVERGENQ14626
HOGENOMQ14626
Homologs : HomoloGeneIL11RA
Homology/Alignments : Family Browser (UCSC)IL11RA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL11RA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL11RA
dbVarIL11RA
ClinVarIL11RA
1000_GenomesIL11RA 
Exome Variant ServerIL11RA
ExAC (Exome Aggregation Consortium)IL11RA (select the gene name)
Genetic variants : HAPMAP3590
Genomic Variants (DGV)IL11RA [DGVbeta]
DECIPHER (Syndromes)9:34652182-34661898  ENSG00000137070
CONAN: Copy Number AnalysisIL11RA 
Mutations
ICGC Data PortalIL11RA 
TCGA Data PortalIL11RA 
Broad Tumor PortalIL11RA
OASIS PortalIL11RA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL11RA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL11RA
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch IL11RA
DgiDB (Drug Gene Interaction Database)IL11RA
DoCM (Curated mutations)IL11RA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL11RA (select a term)
intoGenIL11RA
Cancer3DIL11RA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600939    614188   
Orphanet20578   
MedgenIL11RA
Genetic Testing Registry IL11RA
NextProtQ14626 [Medical]
TSGene3590
GENETestsIL11RA
Huge Navigator IL11RA [HugePedia]
snp3D : Map Gene to Disease3590
BioCentury BCIQIL11RA
ClinGenIL11RA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3590
Chemical/Pharm GKB GenePA29782
Clinical trialIL11RA
Miscellaneous
canSAR (ICR)IL11RA (select the gene name)
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL11RA
EVEXIL11RA
GoPubMedIL11RA
iHOPIL11RA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:10:33 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.