Atlas of Genetics and Cytogenetics in Oncology and Haematology

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IL17RB (interleukin 17 receptor B)

Identity

Other namesCRL4
EVI27
IL17BR
IL17RH1
HGNC (Hugo) IL17RB
LocusID (NCBI) 55540
Location 3p21.1
Location_base_pair Starts at 53880577 and ends at 53899827 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)IL17RB   18015
Entrez_Gene (NCBI)IL17RB  55540  interleukin 17 receptor B
Cards
GeneCards (Weizmann)IL17RB
Ensembl (Hinxton)ENSG00000056736 [Gene_View]  chr3:53880577-53899827 [Contig_View]  IL17RB [Vega]
AceView (NCBI)IL17RB
Genatlas (Paris)IL17RB
SOURCE (Stanford)NM_018725 NM_172234
Genomic and cartography
GoldenPath (UCSC)IL17RB  -  3p21.1   chr3:53880577-53899827 +  3p21.1   [Description]    (hg19-Feb_2009)
EnsemblIL17RB - 3p21.1 [CytoView]
Mapping of homologs : NCBIIL17RB [Mapview]
OMIM605458   
Gene and transcription
Genbank (Entrez)AF208110 AF208111 AF212365 AF250309 AK307749
RefSeq transcript (SRS)NM_018725 NM_172234
RefSeq transcript (Entrez)NM_018725 NM_172234
RefSeq genomic (SRS)AC_000135 NC_000003 NC_018914 NT_022517 NW_001838877 NW_004078011
RefSeq genomic (Entrez)AC_000135 NC_000003 NC_018914 NT_022517 NW_001838877 NW_004078011
Consensus coding sequences : CCDS (NCBI)IL17RB
Cluster EST : UnigeneHs.654970 [ SRS ] Hs.654970 [ NCBI ]
CGAP (NCI)Hs.654970
Alternative Splicing : Fast-db (Paris)GSHG0020866
Alternative Splicing GalleryENSG00000056736
Gene ExpressionIL17RB [ NCBI-GEO ]   IL17RB [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRM6 (SRS) Q9NRM6 (Uniprot)
NextProtQ9NRM6
With graphics : InterProQ9NRM6
Splice isoforms : SwissVarQ9NRM6(Swissvar)
Domaine pattern : Prosite (SRS)SEFIR (PS51534)   
Domaine pattern : Prosite (Expaxy)SEFIR (PS51534)   
Domains : Interpro (SRS)SEFIR   
Domains : Interpro (EBI)SEFIR   
Related proteins : CluSTrQ9NRM6
Domain families : Pfam (SRS)SEFIR (PF08357)   
Domain families : Pfam (Sanger)SEFIR (PF08357)   
Domain families : Pfam (NCBI)pfam08357   
DMDM55540
Blocks (Seattle)Q9NRM6
Human Protein AtlasENSG00000056736
HPRD05677
IPIIPI00148059   IPI00220930   IPI00945459   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRM6
IntAct (EBI)Q9NRM6
FunCoupENSG00000056736
REACTOMEIL17RB
Protein Interaction Database55540
BioGRIDIL17RB
InParanoidQ9NRM6
Interologous Interaction database Q9NRM6
IntegromeDBIL17RB
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)IL17RB
SNP (GeneSNP Utah)IL17RB
SNP : HGBaseIL17RB
Genetic variants : HAPMAPIL17RB
Somatic Mutations in Cancer : COSMICIL17RB 
CONAN: Copy Number AnalysisIL17RB 
Mutations and Diseases : HGMDIL17RB
OMIM605458   
GENETests605458   
Disease Genetic AssociationIL17RB
Huge Navigator IL17RB [HugePedia]  IL17RB [HugeCancerGEM]
Genomic VariantsIL17RB  IL17RB [DGVbeta]
snp3D : Map Gene to Disease55540
General knowledge
Homologs : HomoloGeneIL17RB
Homology/Alignments : Family Browser (UCSC)IL17RB
Phylogenetic Trees/Animal Genes : TreeFamIL17RB
Chemical/Protein Interactions : CTD55540
Chemical/Pharm GKB GenePA29796
Clinical trialIL17RB
Cancer Resource (Charite)ENSG00000056736
Ontology : AmiGOregulation of cell growth  cytokine receptor activity  extracellular region  cytoplasm  integral to plasma membrane  defense response  cell surface  membrane  cytokine-mediated signaling pathway  
Ontology : EGO-EBIregulation of cell growth  cytokine receptor activity  extracellular region  cytoplasm  integral to plasma membrane  defense response  cell surface  membrane  cytokine-mediated signaling pathway  
Pathways : KEGGCytokine-cytokine receptor interaction
Other databases
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
PubGeneIL17RB
iHOPIL17RB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:44:38 CEST 2013
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