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IL17RB (interleukin 17 receptor B)

Identity

Alias_namesIL17BR
interleukin 17B receptor
Alias_symbol (synonym)IL17RH1
EVI27
CRL4
Other alias
HGNC (Hugo) IL17RB
LocusID (NCBI) 55540
Atlas_Id 46582
Location 3p21.1  [Link to chromosome band 3p21]
Location_base_pair Starts at 53846550 and ends at 53865800 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL17RB   18015
Cards
Entrez_Gene (NCBI)IL17RB  55540  interleukin 17 receptor B
AliasesCRL4; EVI27; IL17BR; IL17RH1
GeneCards (Weizmann)IL17RB
Ensembl hg19 (Hinxton)ENSG00000056736 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000056736 [Gene_View]  chr3:53846550-53865800 [Contig_View]  IL17RB [Vega]
ICGC DataPortalENSG00000056736
TCGA cBioPortalIL17RB
AceView (NCBI)IL17RB
Genatlas (Paris)IL17RB
WikiGenes55540
SOURCE (Princeton)IL17RB
Genetics Home Reference (NIH)IL17RB
Genomic and cartography
GoldenPath hg38 (UCSC)IL17RB  -     chr3:53846550-53865800 +  3p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL17RB  -     3p21.1   [Description]    (hg19-Feb_2009)
EnsemblIL17RB - 3p21.1 [CytoView hg19]  IL17RB - 3p21.1 [CytoView hg38]
Mapping of homologs : NCBIIL17RB [Mapview hg19]  IL17RB [Mapview hg38]
OMIM605458   
Gene and transcription
Genbank (Entrez)AF208110 AF208111 AF212365 AF250309 AK307749
RefSeq transcript (Entrez)NM_018725 NM_172234
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL17RB
Cluster EST : UnigeneHs.654970 [ NCBI ]
CGAP (NCI)Hs.654970
Alternative Splicing GalleryENSG00000056736
Gene ExpressionIL17RB [ NCBI-GEO ]   IL17RB [ EBI - ARRAY_EXPRESS ]   IL17RB [ SEEK ]   IL17RB [ MEM ]
Gene Expression Viewer (FireBrowse)IL17RB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55540
GTEX Portal (Tissue expression)IL17RB
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRM6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRM6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRM6
Splice isoforms : SwissVarQ9NRM6
PhosPhoSitePlusQ9NRM6
Domaine pattern : Prosite (Expaxy)SEFIR (PS51534)   
Domains : Interpro (EBI)IL17R_fnIII_D1    SEFIR_dom   
Domain families : Pfam (Sanger)IL17R_fnIII_D1 (PF16556)    SEFIR (PF08357)   
Domain families : Pfam (NCBI)pfam16556    pfam08357   
Conserved Domain (NCBI)IL17RB
DMDM Disease mutations55540
Blocks (Seattle)IL17RB
SuperfamilyQ9NRM6
Human Protein AtlasENSG00000056736
Peptide AtlasQ9NRM6
HPRD05677
IPIIPI00148059   IPI00220930   IPI00945459   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRM6
IntAct (EBI)Q9NRM6
FunCoupENSG00000056736
BioGRIDIL17RB
STRING (EMBL)IL17RB
ZODIACIL17RB
Ontologies - Pathways
QuickGOQ9NRM6
Ontology : AmiGOregulation of cell growth  cytokine receptor activity  extracellular region  cytoplasm  plasma membrane  integral component of plasma membrane  defense response  cell surface  membrane  cytokine-mediated signaling pathway  interleukin-17 receptor activity  positive regulation of inflammatory response  positive regulation of interleukin-5 secretion  positive regulation of interleukin-13 secretion  
Ontology : EGO-EBIregulation of cell growth  cytokine receptor activity  extracellular region  cytoplasm  plasma membrane  integral component of plasma membrane  defense response  cell surface  membrane  cytokine-mediated signaling pathway  interleukin-17 receptor activity  positive regulation of inflammatory response  positive regulation of interleukin-5 secretion  positive regulation of interleukin-13 secretion  
Pathways : KEGGCytokine-cytokine receptor interaction   
NDEx NetworkIL17RB
Atlas of Cancer Signalling NetworkIL17RB
Wikipedia pathwaysIL17RB
Orthology - Evolution
OrthoDB55540
GeneTree (enSembl)ENSG00000056736
Phylogenetic Trees/Animal Genes : TreeFamIL17RB
HOVERGENQ9NRM6
HOGENOMQ9NRM6
Homologs : HomoloGeneIL17RB
Homology/Alignments : Family Browser (UCSC)IL17RB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL17RB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL17RB
dbVarIL17RB
ClinVarIL17RB
1000_GenomesIL17RB 
Exome Variant ServerIL17RB
ExAC (Exome Aggregation Consortium)IL17RB (select the gene name)
Genetic variants : HAPMAP55540
Genomic Variants (DGV)IL17RB [DGVbeta]
DECIPHERIL17RB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL17RB 
Mutations
ICGC Data PortalIL17RB 
TCGA Data PortalIL17RB 
Broad Tumor PortalIL17RB
OASIS PortalIL17RB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL17RB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL17RB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL17RB
DgiDB (Drug Gene Interaction Database)IL17RB
DoCM (Curated mutations)IL17RB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL17RB (select a term)
intoGenIL17RB
Cancer3DIL17RB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605458   
Orphanet
MedgenIL17RB
Genetic Testing Registry IL17RB
NextProtQ9NRM6 [Medical]
TSGene55540
GENETestsIL17RB
Target ValidationIL17RB
Huge Navigator IL17RB [HugePedia]
snp3D : Map Gene to Disease55540
BioCentury BCIQIL17RB
ClinGenIL17RB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55540
Chemical/Pharm GKB GenePA29796
Clinical trialIL17RB
Miscellaneous
canSAR (ICR)IL17RB (select the gene name)
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL17RB
EVEXIL17RB
GoPubMedIL17RB
iHOPIL17RB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:38:19 CEST 2017

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