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IL17RC (interleukin 17 receptor C)

Identity

Alias_symbol (synonym)IL17-RL
Other aliasCANDF9
IL17RL
HGNC (Hugo) IL17RC
LocusID (NCBI) 84818
Atlas_Id 46195
Location 3p25.3  [Link to chromosome band 3p25]
Location_base_pair Starts at 9917074 and ends at 9933621 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
IL17RC (3p25.3) / ARPC4 (3p25.3)IL17RC (3p25.3) / CRELD1 (3p25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL17RC   18358
Cards
Entrez_Gene (NCBI)IL17RC  84818  interleukin 17 receptor C
AliasesCANDF9; IL17-RL; IL17RL
GeneCards (Weizmann)IL17RC
Ensembl hg19 (Hinxton)ENSG00000163702 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163702 [Gene_View]  chr3:9917074-9933621 [Contig_View]  IL17RC [Vega]
ICGC DataPortalENSG00000163702
TCGA cBioPortalIL17RC
AceView (NCBI)IL17RC
Genatlas (Paris)IL17RC
WikiGenes84818
SOURCE (Princeton)IL17RC
Genetics Home Reference (NIH)IL17RC
Genomic and cartography
GoldenPath hg38 (UCSC)IL17RC  -     chr3:9917074-9933621 +  3p25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL17RC  -     3p25.3   [Description]    (hg19-Feb_2009)
EnsemblIL17RC - 3p25.3 [CytoView hg19]  IL17RC - 3p25.3 [CytoView hg38]
Mapping of homologs : NCBIIL17RC [Mapview hg19]  IL17RC [Mapview hg38]
OMIM610925   616445   
Gene and transcription
Genbank (Entrez)AF458065 AK075534 AK092907 AK094746 AK096824
RefSeq transcript (Entrez)NM_001203263 NM_001203264 NM_001203265 NM_032732 NM_153460 NM_153461 NM_153462 NM_153463
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL17RC
Cluster EST : UnigeneHs.129959 [ NCBI ]
CGAP (NCI)Hs.129959
Alternative Splicing GalleryENSG00000163702
Gene ExpressionIL17RC [ NCBI-GEO ]   IL17RC [ EBI - ARRAY_EXPRESS ]   IL17RC [ SEEK ]   IL17RC [ MEM ]
Gene Expression Viewer (FireBrowse)IL17RC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84818
GTEX Portal (Tissue expression)IL17RC
Human Protein AtlasENSG00000163702-IL17RC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NAC3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NAC3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NAC3
Splice isoforms : SwissVarQ8NAC3
PhosPhoSitePlusQ8NAC3
Domaine pattern : Prosite (Expaxy)SEFIR (PS51534)   
Domains : Interpro (EBI)IL-17_rcpt_C/E_N    SEFIR_dom   
Domain families : Pfam (Sanger)IL17_R_N (PF15037)    SEFIR (PF08357)   
Domain families : Pfam (NCBI)pfam15037    pfam08357   
Conserved Domain (NCBI)IL17RC
DMDM Disease mutations84818
Blocks (Seattle)IL17RC
SuperfamilyQ8NAC3
Human Protein Atlas [tissue]ENSG00000163702-IL17RC [tissue]
Peptide AtlasQ8NAC3
HPRD17142
IPIIPI00300564   IPI00303074   IPI00607747   IPI00013761   IPI00910002   IPI01009373   IPI00166384   IPI00985066   IPI00789838   IPI00792827   IPI00877101   IPI00908792   IPI00925965   IPI00925641   IPI00926365   IPI00926161   IPI01025141   IPI00925220   IPI00980152   
Protein Interaction databases
DIP (DOE-UCLA)Q8NAC3
IntAct (EBI)Q8NAC3
FunCoupENSG00000163702
BioGRIDIL17RC
STRING (EMBL)IL17RC
ZODIACIL17RC
Ontologies - Pathways
QuickGOQ8NAC3
Ontology : AmiGOreceptor binding  plasma membrane  integral component of plasma membrane  cell surface  cytokine-mediated signaling pathway  interleukin-17 receptor activity  defense response to fungus  granulocyte chemotaxis  positive regulation of cytokine production involved in inflammatory response  positive regulation of interleukin-6 secretion  
Ontology : EGO-EBIreceptor binding  plasma membrane  integral component of plasma membrane  cell surface  cytokine-mediated signaling pathway  interleukin-17 receptor activity  defense response to fungus  granulocyte chemotaxis  positive regulation of cytokine production involved in inflammatory response  positive regulation of interleukin-6 secretion  
NDEx NetworkIL17RC
Atlas of Cancer Signalling NetworkIL17RC
Wikipedia pathwaysIL17RC
Orthology - Evolution
OrthoDB84818
GeneTree (enSembl)ENSG00000163702
Phylogenetic Trees/Animal Genes : TreeFamIL17RC
HOVERGENQ8NAC3
HOGENOMQ8NAC3
Homologs : HomoloGeneIL17RC
Homology/Alignments : Family Browser (UCSC)IL17RC
Gene fusions - Rearrangements
Tumor Fusion PortalIL17RC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL17RC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL17RC
dbVarIL17RC
ClinVarIL17RC
1000_GenomesIL17RC 
Exome Variant ServerIL17RC
ExAC (Exome Aggregation Consortium)ENSG00000163702
GNOMAD BrowserENSG00000163702
Genetic variants : HAPMAP84818
Genomic Variants (DGV)IL17RC [DGVbeta]
DECIPHERIL17RC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL17RC 
Mutations
ICGC Data PortalIL17RC 
TCGA Data PortalIL17RC 
Broad Tumor PortalIL17RC
OASIS PortalIL17RC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL17RC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL17RC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL17RC
DgiDB (Drug Gene Interaction Database)IL17RC
DoCM (Curated mutations)IL17RC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL17RC (select a term)
intoGenIL17RC
Cancer3DIL17RC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610925    616445   
Orphanet432   
DisGeNETIL17RC
MedgenIL17RC
Genetic Testing Registry IL17RC
NextProtQ8NAC3 [Medical]
TSGene84818
GENETestsIL17RC
Target ValidationIL17RC
Huge Navigator IL17RC [HugePedia]
snp3D : Map Gene to Disease84818
BioCentury BCIQIL17RC
ClinGenIL17RC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84818
Chemical/Pharm GKB GenePA134986616
Clinical trialIL17RC
Miscellaneous
canSAR (ICR)IL17RC (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL17RC
EVEXIL17RC
GoPubMedIL17RC
iHOPIL17RC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:17:38 CET 2017

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