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IL17REL (interleukin 17 receptor E like)

Identity

Alias_symbol (synonym)FLJ41993
Other alias-
HGNC (Hugo) IL17REL
LocusID (NCBI) 400935
Atlas_Id 64590
Location 22q13.33  [Link to chromosome band 22q13]
Location_base_pair Starts at 49994513 and ends at 50012626 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL17REL   33808
Cards
Entrez_Gene (NCBI)IL17REL  400935  interleukin 17 receptor E like
Aliases
GeneCards (Weizmann)IL17REL
Ensembl hg19 (Hinxton)ENSG00000188263 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188263 [Gene_View]  chr22:49994513-50012626 [Contig_View]  IL17REL [Vega]
ICGC DataPortalENSG00000188263
TCGA cBioPortalIL17REL
AceView (NCBI)IL17REL
Genatlas (Paris)IL17REL
WikiGenes400935
SOURCE (Princeton)IL17REL
Genetics Home Reference (NIH)IL17REL
Genomic and cartography
GoldenPath hg38 (UCSC)IL17REL  -     chr22:49994513-50012626 -  22q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL17REL  -     22q13.33   [Description]    (hg19-Feb_2009)
EnsemblIL17REL - 22q13.33 [CytoView hg19]  IL17REL - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBIIL17REL [Mapview hg19]  IL17REL [Mapview hg38]
OMIM613414   
Gene and transcription
Genbank (Entrez)AK123987
RefSeq transcript (Entrez)NM_001001694
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL17REL
Cluster EST : UnigeneHs.526712 [ NCBI ]
CGAP (NCI)Hs.526712
Alternative Splicing GalleryENSG00000188263
Gene ExpressionIL17REL [ NCBI-GEO ]   IL17REL [ EBI - ARRAY_EXPRESS ]   IL17REL [ SEEK ]   IL17REL [ MEM ]
Gene Expression Viewer (FireBrowse)IL17REL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400935
GTEX Portal (Tissue expression)IL17REL
Human Protein AtlasENSG00000188263-IL17REL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZVW7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZVW7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZVW7
Splice isoforms : SwissVarQ6ZVW7
PhosPhoSitePlusQ6ZVW7
Domains : Interpro (EBI)IL-17_rcpt_C/E_N   
Domain families : Pfam (Sanger)IL17_R_N (PF15037)   
Domain families : Pfam (NCBI)pfam15037   
Conserved Domain (NCBI)IL17REL
DMDM Disease mutations400935
Blocks (Seattle)IL17REL
SuperfamilyQ6ZVW7
Human Protein Atlas [tissue]ENSG00000188263-IL17REL [tissue]
Peptide AtlasQ6ZVW7
HPRD13456
IPIIPI00413812   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZVW7
IntAct (EBI)Q6ZVW7
FunCoupENSG00000188263
BioGRIDIL17REL
STRING (EMBL)IL17REL
ZODIACIL17REL
Ontologies - Pathways
QuickGOQ6ZVW7
Ontology : AmiGOintegral component of plasma membrane  cytokine-mediated signaling pathway  interleukin-17 receptor activity  
Ontology : EGO-EBIintegral component of plasma membrane  cytokine-mediated signaling pathway  interleukin-17 receptor activity  
NDEx NetworkIL17REL
Atlas of Cancer Signalling NetworkIL17REL
Wikipedia pathwaysIL17REL
Orthology - Evolution
OrthoDB400935
GeneTree (enSembl)ENSG00000188263
Phylogenetic Trees/Animal Genes : TreeFamIL17REL
HOVERGENQ6ZVW7
HOGENOMQ6ZVW7
Homologs : HomoloGeneIL17REL
Homology/Alignments : Family Browser (UCSC)IL17REL
Gene fusions - Rearrangements
Fusion: Tumor Portal IL17REL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL17REL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL17REL
dbVarIL17REL
ClinVarIL17REL
1000_GenomesIL17REL 
Exome Variant ServerIL17REL
ExAC (Exome Aggregation Consortium)ENSG00000188263
GNOMAD BrowserENSG00000188263
Genetic variants : HAPMAP400935
Genomic Variants (DGV)IL17REL [DGVbeta]
DECIPHERIL17REL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL17REL 
Mutations
ICGC Data PortalIL17REL 
TCGA Data PortalIL17REL 
Broad Tumor PortalIL17REL
OASIS PortalIL17REL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL17REL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL17REL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL17REL
DgiDB (Drug Gene Interaction Database)IL17REL
DoCM (Curated mutations)IL17REL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL17REL (select a term)
intoGenIL17REL
Cancer3DIL17REL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613414   
Orphanet
MedgenIL17REL
Genetic Testing Registry IL17REL
NextProtQ6ZVW7 [Medical]
TSGene400935
GENETestsIL17REL
Target ValidationIL17REL
Huge Navigator IL17REL [HugePedia]
snp3D : Map Gene to Disease400935
BioCentury BCIQIL17REL
ClinGenIL17REL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400935
Chemical/Pharm GKB GenePA162391970
Clinical trialIL17REL
Miscellaneous
canSAR (ICR)IL17REL (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL17REL
EVEXIL17REL
GoPubMedIL17REL
iHOPIL17REL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:51:30 CET 2017

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