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IL18BP (interleukin 18 binding protein)

Identity

Alias (NCBI)FVH
IL18BPa
HGNC (Hugo) IL18BP
HGNC Alias symbIL18BPa
HGNC Alias nameMC51L-53L-54L homolog gene product
LocusID (NCBI) 10068
Atlas_Id 51571
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 71998912 and ends at 72002804 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)IL18BP   5987
Cards
Entrez_Gene (NCBI)IL18BP    interleukin 18 binding protein
AliasesFVH; IL18BPa
GeneCards (Weizmann)IL18BP
Ensembl hg19 (Hinxton)ENSG00000137496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137496 [Gene_View]  ENSG00000137496 [Sequence]  chr11:71998912-72002804 [Contig_View]  IL18BP [Vega]
ICGC DataPortalENSG00000137496
TCGA cBioPortalIL18BP
AceView (NCBI)IL18BP
Genatlas (Paris)IL18BP
SOURCE (Princeton)IL18BP
Genetics Home Reference (NIH)IL18BP
Genomic and cartography
GoldenPath hg38 (UCSC)IL18BP  -     chr11:71998912-72002804 +  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL18BP  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathIL18BP - 11q13.4 [CytoView hg19]  IL18BP - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000137496
genome Data Viewer NCBIIL18BP [Mapview hg19]  
OMIM604113   618549   
Gene and transcription
Genbank (Entrez)AB019504 AF086560 AF110799 AF110800 AF110801
RefSeq transcript (Entrez)NM_001039659 NM_001039660 NM_001145055 NM_001145057 NM_005699 NM_173042 NM_173043 NM_173044
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL18BP
Alternative Splicing GalleryENSG00000137496
Gene ExpressionIL18BP [ NCBI-GEO ]   IL18BP [ EBI - ARRAY_EXPRESS ]   IL18BP [ SEEK ]   IL18BP [ MEM ]
Gene Expression Viewer (FireBrowse)IL18BP [ Firebrowse - Broad ]
GenevisibleExpression of IL18BP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10068
GTEX Portal (Tissue expression)IL18BP
Human Protein AtlasENSG00000137496-IL18BP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95998   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95998  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95998
Splice isoforms : SwissVarO95998
PhosPhoSitePlusO95998
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_dom_sf    Ig-like_fold    IL18BP   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IL18BP
Blocks (Seattle)IL18BP
SuperfamilyO95998
Human Protein Atlas [tissue]ENSG00000137496-IL18BP [tissue]
Peptide AtlasO95998
HPRD04984
IPIIPI00873924   IPI00304305   IPI00848010   IPI00980560   
Protein Interaction databases
DIP (DOE-UCLA)O95998
IntAct (EBI)O95998
BioGRIDIL18BP
STRING (EMBL)IL18BP
ZODIACIL18BP
Ontologies - Pathways
QuickGOO95998
Ontology : AmiGOextracellular region  extracellular space  interleukin-18-mediated signaling pathway  interleukin-18 binding  interleukin-18 binding  T-helper 1 type immune response  T-helper 1 type immune response  receptor antagonist activity  extracellular exosome  cellular response to cytokine stimulus  negative regulation of signaling receptor activity  
Ontology : EGO-EBIextracellular region  extracellular space  interleukin-18-mediated signaling pathway  interleukin-18 binding  interleukin-18 binding  T-helper 1 type immune response  T-helper 1 type immune response  receptor antagonist activity  extracellular exosome  cellular response to cytokine stimulus  negative regulation of signaling receptor activity  
NDEx NetworkIL18BP
Atlas of Cancer Signalling NetworkIL18BP
Wikipedia pathwaysIL18BP
Orthology - Evolution
OrthoDB10068
GeneTree (enSembl)ENSG00000137496
Phylogenetic Trees/Animal Genes : TreeFamIL18BP
HOGENOMO95998
Homologs : HomoloGeneIL18BP
Homology/Alignments : Family Browser (UCSC)IL18BP
Gene fusions - Rearrangements
Fusion : QuiverIL18BP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL18BP [hg38]
dbVarIL18BP
ClinVarIL18BP
MonarchIL18BP
1000_GenomesIL18BP 
Exome Variant ServerIL18BP
GNOMAD BrowserENSG00000137496
Varsome BrowserIL18BP
Genomic Variants (DGV)IL18BP [DGVbeta]
DECIPHERIL18BP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL18BP 
Mutations
ICGC Data PortalIL18BP 
TCGA Data PortalIL18BP 
Broad Tumor PortalIL18BP
OASIS PortalIL18BP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL18BP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DIL18BP
Mutations and Diseases : HGMDIL18BP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL18BP
DgiDB (Drug Gene Interaction Database)IL18BP
DoCM (Curated mutations)IL18BP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL18BP (select a term)
intoGenIL18BP
Cancer3DIL18BP(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604113    618549   
Orphanet
DisGeNETIL18BP
MedgenIL18BP
Genetic Testing Registry IL18BP
NextProtO95998 [Medical]
GENETestsIL18BP
Target ValidationIL18BP
Huge Navigator IL18BP [HugePedia]
ClinGenIL18BP
Clinical trials, drugs, therapy
MyCancerGenomeIL18BP
Protein Interactions : CTD
Pharm GKB GenePA29803
PharosO95998
Clinical trialIL18BP
Miscellaneous
canSAR (ICR)IL18BP (select the gene name)
HarmonizomeIL18BP
DataMed IndexIL18BP
Probes
Litterature
PubMed60 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXIL18BP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:20:07 CET 2021

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