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IL1RL2 (interleukin 1 receptor-like 2)

Identity

Alias_symbol (synonym)IL1R-rp2
IL1RRP2
Other aliasIL-1Rrp2
IL-36R
HGNC (Hugo) IL1RL2
LocusID (NCBI) 8808
Atlas_Id 64594
Location 2q12.1  [Link to chromosome band 2q12]
Location_base_pair Starts at 102803433 and ends at 102855811 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
IL1RL2 (2q12.1) / IL1R2 (2q11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL1RL2   5999
Cards
Entrez_Gene (NCBI)IL1RL2  8808  interleukin 1 receptor-like 2
AliasesIL-1Rrp2; IL-36R; IL1R-rp2; IL1RRP2
GeneCards (Weizmann)IL1RL2
Ensembl hg19 (Hinxton)ENSG00000115598 [Gene_View]  chr2:102803433-102855811 [Contig_View]  IL1RL2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000115598 [Gene_View]  chr2:102803433-102855811 [Contig_View]  IL1RL2 [Vega]
ICGC DataPortalENSG00000115598
TCGA cBioPortalIL1RL2
AceView (NCBI)IL1RL2
Genatlas (Paris)IL1RL2
WikiGenes8808
SOURCE (Princeton)IL1RL2
Genetics Home Reference (NIH)IL1RL2
Genomic and cartography
GoldenPath hg19 (UCSC)IL1RL2  -     chr2:102803433-102855811 +  2q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IL1RL2  -     2q12.1   [Description]    (hg38-Dec_2013)
EnsemblIL1RL2 - 2q12.1 [CytoView hg19]  IL1RL2 - 2q12.1 [CytoView hg38]
Mapping of homologs : NCBIIL1RL2 [Mapview hg19]  IL1RL2 [Mapview hg38]
OMIM604512   
Gene and transcription
Genbank (Entrez)AF284434 AK315334 BC107064 U49065
RefSeq transcript (Entrez)NM_003854
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929303
Consensus coding sequences : CCDS (NCBI)IL1RL2
Cluster EST : UnigeneHs.659863 [ NCBI ]
CGAP (NCI)Hs.659863
Alternative Splicing GalleryENSG00000115598
Gene ExpressionIL1RL2 [ NCBI-GEO ]   IL1RL2 [ EBI - ARRAY_EXPRESS ]   IL1RL2 [ SEEK ]   IL1RL2 [ MEM ]
Gene Expression Viewer (FireBrowse)IL1RL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8808
GTEX Portal (Tissue expression)IL1RL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HB29   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HB29  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HB29
Splice isoforms : SwissVarQ9HB29
PhosPhoSitePlusQ9HB29
Domaine pattern : Prosite (Expaxy)IG_LIKE (PS50835)    TIR (PS50104)   
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    IL-1_rcpt_fam    IL-1_rcpt_I-typ    IL-1_rcpt_I/II-typ    TIR_dom   
Domain families : Pfam (Sanger)TIR (PF01582)   
Domain families : Pfam (NCBI)pfam01582   
Domain families : Smart (EMBL)IG (SM00409)  TIR (SM00255)  
Conserved Domain (NCBI)IL1RL2
DMDM Disease mutations8808
Blocks (Seattle)IL1RL2
SuperfamilyQ9HB29
Human Protein AtlasENSG00000115598
Peptide AtlasQ9HB29
HPRD05150
IPIIPI00884031   IPI00795930   IPI00915980   
Protein Interaction databases
DIP (DOE-UCLA)Q9HB29
IntAct (EBI)Q9HB29
FunCoupENSG00000115598
BioGRIDIL1RL2
STRING (EMBL)IL1RL2
ZODIACIL1RL2
Ontologies - Pathways
QuickGOQ9HB29
Ontology : AmiGOinterleukin-1 receptor activity  interleukin-1, Type I, activating receptor activity  integral component of plasma membrane  inflammatory response  cellular defense response  signal transduction  cytokine-mediated signaling pathway  positive regulation of interleukin-6 production  innate immune response  positive regulation of T cell differentiation  regulation of inflammatory response  interleukin-1-mediated signaling pathway  
Ontology : EGO-EBIinterleukin-1 receptor activity  interleukin-1, Type I, activating receptor activity  integral component of plasma membrane  inflammatory response  cellular defense response  signal transduction  cytokine-mediated signaling pathway  positive regulation of interleukin-6 production  innate immune response  positive regulation of T cell differentiation  regulation of inflammatory response  interleukin-1-mediated signaling pathway  
NDEx NetworkIL1RL2
Atlas of Cancer Signalling NetworkIL1RL2
Wikipedia pathwaysIL1RL2
Orthology - Evolution
OrthoDB8808
GeneTree (enSembl)ENSG00000115598
Phylogenetic Trees/Animal Genes : TreeFamIL1RL2
HOVERGENQ9HB29
HOGENOMQ9HB29
Homologs : HomoloGeneIL1RL2
Homology/Alignments : Family Browser (UCSC)IL1RL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL1RL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL1RL2
dbVarIL1RL2
ClinVarIL1RL2
1000_GenomesIL1RL2 
Exome Variant ServerIL1RL2
ExAC (Exome Aggregation Consortium)IL1RL2 (select the gene name)
Genetic variants : HAPMAP8808
Genomic Variants (DGV)IL1RL2 [DGVbeta]
DECIPHER (Syndromes)2:102803433-102855811  ENSG00000115598
CONAN: Copy Number AnalysisIL1RL2 
Mutations
ICGC Data PortalIL1RL2 
TCGA Data PortalIL1RL2 
Broad Tumor PortalIL1RL2
OASIS PortalIL1RL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL1RL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL1RL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL1RL2
DgiDB (Drug Gene Interaction Database)IL1RL2
DoCM (Curated mutations)IL1RL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL1RL2 (select a term)
intoGenIL1RL2
Cancer3DIL1RL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604512   
Orphanet
MedgenIL1RL2
Genetic Testing Registry IL1RL2
NextProtQ9HB29 [Medical]
TSGene8808
GENETestsIL1RL2
Huge Navigator IL1RL2 [HugePedia]
snp3D : Map Gene to Disease8808
BioCentury BCIQIL1RL2
ClinGenIL1RL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8808
Chemical/Pharm GKB GenePA29815
Clinical trialIL1RL2
Miscellaneous
canSAR (ICR)IL1RL2 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL1RL2
EVEXIL1RL2
GoPubMedIL1RL2
iHOPIL1RL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:47 CET 2017

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