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IL21-AS1 (IL21 antisense RNA 1)

Identity

Alias_namesIL21 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) IL21-AS1
LocusID (NCBI) 100996941
Atlas_Id 64595
Location 4q27  [Link to chromosome band 4q27]
Location_base_pair Starts at 122618983 and ends at 122689156 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL21-AS1   40299
Cards
Entrez_Gene (NCBI)IL21-AS1  100996941  IL21 antisense RNA 1
Aliases
GeneCards (Weizmann)IL21-AS1
Ensembl hg19 (Hinxton)ENSG00000227145 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227145 [Gene_View]  chr4:122618983-122689156 [Contig_View]  IL21-AS1 [Vega]
ICGC DataPortalENSG00000227145
TCGA cBioPortalIL21-AS1
AceView (NCBI)IL21-AS1
Genatlas (Paris)IL21-AS1
WikiGenes100996941
SOURCE (Princeton)IL21-AS1
Genetics Home Reference (NIH)IL21-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)IL21-AS1  -     chr4:122618983-122689156 +  4q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL21-AS1  -     4q27   [Description]    (hg19-Feb_2009)
EnsemblIL21-AS1 - 4q27 [CytoView hg19]  IL21-AS1 - 4q27 [CytoView hg38]
Mapping of homologs : NCBIIL21-AS1 [Mapview hg19]  IL21-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC045668
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL21-AS1
Cluster EST : UnigeneHs.439487 [ NCBI ]
CGAP (NCI)Hs.439487
Alternative Splicing GalleryENSG00000227145
Gene ExpressionIL21-AS1 [ NCBI-GEO ]   IL21-AS1 [ EBI - ARRAY_EXPRESS ]   IL21-AS1 [ SEEK ]   IL21-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)IL21-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100996941
GTEX Portal (Tissue expression)IL21-AS1
Human Protein AtlasENSG00000227145-IL21-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IL21-AS1
DMDM Disease mutations100996941
Blocks (Seattle)IL21-AS1
Human Protein Atlas [tissue]ENSG00000227145-IL21-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000227145
BioGRIDIL21-AS1
STRING (EMBL)IL21-AS1
ZODIACIL21-AS1
Ontologies - Pathways
Huge Navigator IL21-AS1 [HugePedia]
snp3D : Map Gene to Disease100996941
BioCentury BCIQIL21-AS1
ClinGenIL21-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100996941
Clinical trialIL21-AS1
Miscellaneous
canSAR (ICR)IL21-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL21-AS1
EVEXIL21-AS1
GoPubMedIL21-AS1
iHOPIL21-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:51:30 CET 2017

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