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IL25 (interleukin 25)

Identity

Alias_namesIL17E
interleukin 17E
Alias_symbol (synonym)IL-25
IL-17E
Other alias
HGNC (Hugo) IL25
LocusID (NCBI) 64806
Atlas_Id 55649
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 23842070 and ends at 23845612 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL25   13765
Cards
Entrez_Gene (NCBI)IL25  64806  interleukin 25
AliasesIL17E
GeneCards (Weizmann)IL25
Ensembl hg19 (Hinxton)ENSG00000166090 [Gene_View]  chr14:23842070-23845612 [Contig_View]  IL25 [Vega]
Ensembl hg38 (Hinxton)ENSG00000166090 [Gene_View]  chr14:23842070-23845612 [Contig_View]  IL25 [Vega]
ICGC DataPortalENSG00000166090
TCGA cBioPortalIL25
AceView (NCBI)IL25
Genatlas (Paris)IL25
WikiGenes64806
SOURCE (Princeton)IL25
Genetics Home Reference (NIH)IL25
Genomic and cartography
GoldenPath hg19 (UCSC)IL25  -     chr14:23842070-23845612 +  14q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IL25  -     14q11.2   [Description]    (hg38-Dec_2013)
EnsemblIL25 - 14q11.2 [CytoView hg19]  IL25 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIIL25 [Mapview hg19]  IL25 [Mapview hg38]
OMIM605658   
Gene and transcription
Genbank (Entrez)AF305200 AF458059 AF461739 AY359127 BC069565
RefSeq transcript (Entrez)NM_022789 NM_172314
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)IL25
Cluster EST : UnigeneHs.302036 [ NCBI ]
CGAP (NCI)Hs.302036
Alternative Splicing GalleryENSG00000166090
Gene ExpressionIL25 [ NCBI-GEO ]   IL25 [ EBI - ARRAY_EXPRESS ]   IL25 [ SEEK ]   IL25 [ MEM ]
Gene Expression Viewer (FireBrowse)IL25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64806
GTEX Portal (Tissue expression)IL25
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H293   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H293  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H293
Splice isoforms : SwissVarQ9H293
PhosPhoSitePlusQ9H293
Domains : Interpro (EBI)Cystine-knot_cytokine    IL-17_fam   
Domain families : Pfam (Sanger)IL17 (PF06083)   
Domain families : Pfam (NCBI)pfam06083   
Conserved Domain (NCBI)IL25
DMDM Disease mutations64806
Blocks (Seattle)IL25
SuperfamilyQ9H293
Human Protein AtlasENSG00000166090
Peptide AtlasQ9H293
HPRD05742
IPIIPI00009731   IPI00332192   
Protein Interaction databases
DIP (DOE-UCLA)Q9H293
IntAct (EBI)Q9H293
FunCoupENSG00000166090
BioGRIDIL25
STRING (EMBL)IL25
ZODIACIL25
Ontologies - Pathways
QuickGOQ9H293
Ontology : AmiGOinflammatory response to antigenic stimulus  cytokine activity  extracellular region  extracellular space  inflammatory response  cell surface receptor signaling pathway  biological_process  response to fungus  response to nematode  eosinophil differentiation  interleukin-17E receptor binding  interleukin-13 production  interleukin-5 production  positive regulation of transcription from RNA polymerase II promoter  
Ontology : EGO-EBIinflammatory response to antigenic stimulus  cytokine activity  extracellular region  extracellular space  inflammatory response  cell surface receptor signaling pathway  biological_process  response to fungus  response to nematode  eosinophil differentiation  interleukin-17E receptor binding  interleukin-13 production  interleukin-5 production  positive regulation of transcription from RNA polymerase II promoter  
Pathways : KEGGCytokine-cytokine receptor interaction   
NDEx NetworkIL25
Atlas of Cancer Signalling NetworkIL25
Wikipedia pathwaysIL25
Orthology - Evolution
OrthoDB64806
GeneTree (enSembl)ENSG00000166090
Phylogenetic Trees/Animal Genes : TreeFamIL25
HOVERGENQ9H293
HOGENOMQ9H293
Homologs : HomoloGeneIL25
Homology/Alignments : Family Browser (UCSC)IL25
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL25 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL25
dbVarIL25
ClinVarIL25
1000_GenomesIL25 
Exome Variant ServerIL25
ExAC (Exome Aggregation Consortium)IL25 (select the gene name)
Genetic variants : HAPMAP64806
Genomic Variants (DGV)IL25 [DGVbeta]
DECIPHER (Syndromes)14:23842070-23845612  ENSG00000166090
CONAN: Copy Number AnalysisIL25 
Mutations
ICGC Data PortalIL25 
TCGA Data PortalIL25 
Broad Tumor PortalIL25
OASIS PortalIL25 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL25  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL25
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL25
DgiDB (Drug Gene Interaction Database)IL25
DoCM (Curated mutations)IL25 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL25 (select a term)
intoGenIL25
Cancer3DIL25(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605658   
Orphanet
MedgenIL25
Genetic Testing Registry IL25
NextProtQ9H293 [Medical]
TSGene64806
GENETestsIL25
Huge Navigator IL25 [HugePedia]
snp3D : Map Gene to Disease64806
BioCentury BCIQIL25
ClinGenIL25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64806
Chemical/Pharm GKB GenePA29799
Clinical trialIL25
Miscellaneous
canSAR (ICR)IL25 (select the gene name)
Probes
Litterature
PubMed47 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL25
EVEXIL25
GoPubMedIL25
iHOPIL25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 13:10:41 CET 2017

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