Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

IL31 (interleukin 31)

Identity

Alias_symbol (synonym)IL-31
Other alias
HGNC (Hugo) IL31
LocusID (NCBI) 386653
Atlas_Id 55299
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 122656577 and ends at 122658746 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL31   19372
Cards
Entrez_Gene (NCBI)IL31  386653  interleukin 31
AliasesIL-31
GeneCards (Weizmann)IL31
Ensembl hg19 (Hinxton)ENSG00000204671 [Gene_View]  chr12:122656577-122658746 [Contig_View]  IL31 [Vega]
Ensembl hg38 (Hinxton)ENSG00000204671 [Gene_View]  chr12:122656577-122658746 [Contig_View]  IL31 [Vega]
ICGC DataPortalENSG00000204671
TCGA cBioPortalIL31
AceView (NCBI)IL31
Genatlas (Paris)IL31
WikiGenes386653
SOURCE (Princeton)IL31
Genetics Home Reference (NIH)IL31
Genomic and cartography
GoldenPath hg19 (UCSC)IL31  -     chr12:122656577-122658746 -  12q24.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IL31  -     12q24.31   [Description]    (hg38-Dec_2013)
EnsemblIL31 - 12q24.31 [CytoView hg19]  IL31 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIIL31 [Mapview hg19]  IL31 [Mapview hg38]
OMIM609509   
Gene and transcription
Genbank (Entrez)AY499343 BC132998 BC133000
RefSeq transcript (Entrez)NM_001014336
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_029419 NW_004929386
Consensus coding sequences : CCDS (NCBI)IL31
Cluster EST : UnigeneHs.569071 [ NCBI ]
CGAP (NCI)Hs.569071
Alternative Splicing GalleryENSG00000204671
Gene ExpressionIL31 [ NCBI-GEO ]   IL31 [ EBI - ARRAY_EXPRESS ]   IL31 [ SEEK ]   IL31 [ MEM ]
Gene Expression Viewer (FireBrowse)IL31 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)386653
GTEX Portal (Tissue expression)IL31
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6EBC2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6EBC2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6EBC2
Splice isoforms : SwissVarQ6EBC2
PhosPhoSitePlusQ6EBC2
Domains : Interpro (EBI)IL-31   
Domain families : Pfam (Sanger)IL31 (PF15209)   
Domain families : Pfam (NCBI)pfam15209   
Conserved Domain (NCBI)IL31
DMDM Disease mutations386653
Blocks (Seattle)IL31
SuperfamilyQ6EBC2
Human Protein AtlasENSG00000204671
Peptide AtlasQ6EBC2
HPRD11877
IPIIPI00455213   
Protein Interaction databases
DIP (DOE-UCLA)Q6EBC2
IntAct (EBI)Q6EBC2
FunCoupENSG00000204671
BioGRIDIL31
STRING (EMBL)IL31
ZODIACIL31
Ontologies - Pathways
QuickGOQ6EBC2
Ontology : AmiGOimmune system process  cytokine activity  oncostatin-M receptor binding  extracellular region  extracellular space  
Ontology : EGO-EBIimmune system process  cytokine activity  oncostatin-M receptor binding  extracellular region  extracellular space  
NDEx NetworkIL31
Atlas of Cancer Signalling NetworkIL31
Wikipedia pathwaysIL31
Orthology - Evolution
OrthoDB386653
GeneTree (enSembl)ENSG00000204671
Phylogenetic Trees/Animal Genes : TreeFamIL31
HOVERGENQ6EBC2
HOGENOMQ6EBC2
Homologs : HomoloGeneIL31
Homology/Alignments : Family Browser (UCSC)IL31
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL31 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL31
dbVarIL31
ClinVarIL31
1000_GenomesIL31 
Exome Variant ServerIL31
ExAC (Exome Aggregation Consortium)IL31 (select the gene name)
Genetic variants : HAPMAP386653
Genomic Variants (DGV)IL31 [DGVbeta]
DECIPHER (Syndromes)12:122656577-122658746  ENSG00000204671
CONAN: Copy Number AnalysisIL31 
Mutations
ICGC Data PortalIL31 
TCGA Data PortalIL31 
Broad Tumor PortalIL31
OASIS PortalIL31 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL31  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL31
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL31
DgiDB (Drug Gene Interaction Database)IL31
DoCM (Curated mutations)IL31 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL31 (select a term)
intoGenIL31
Cancer3DIL31(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609509   
Orphanet
MedgenIL31
Genetic Testing Registry IL31
NextProtQ6EBC2 [Medical]
TSGene386653
GENETestsIL31
Huge Navigator IL31 [HugePedia]
snp3D : Map Gene to Disease386653
BioCentury BCIQIL31
ClinGenIL31
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD386653
Chemical/Pharm GKB GenePA134957950
Clinical trialIL31
Miscellaneous
canSAR (ICR)IL31 (select the gene name)
Probes
Litterature
PubMed54 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL31
EVEXIL31
GoPubMedIL31
iHOPIL31
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:10:42 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.