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IL32 (interleukin 32)

Identity

Alias_symbol (synonym)NK4
TAIF
TAIFb
TAIFd
Other aliasIL-32alpha
IL-32beta
IL-32delta
IL-32gamma
TAIFa
TAIFc
HGNC (Hugo) IL32
LocusID (NCBI) 9235
Atlas_Id 50130
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 3065312 and ends at 3069667 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IL32 (16p13.3) / PUS1 (12q24.33)MUC3A (7q22.1) / IL32 (16p13.3)NAA60 (16p13.3) / IL32 (16p13.3)
TTC1 (5q33.3) / IL32 (16p13.3)NAA60 16p13.3 / IL32 16p13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL32   16830
Cards
Entrez_Gene (NCBI)IL32  9235  interleukin 32
AliasesIL-32alpha; IL-32beta; IL-32delta; IL-32gamma; 
NK4; TAIF; TAIFa; TAIFb; TAIFc; TAIFd
GeneCards (Weizmann)IL32
Ensembl hg19 (Hinxton)ENSG00000008517 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000008517 [Gene_View]  chr16:3065312-3069667 [Contig_View]  IL32 [Vega]
ICGC DataPortalENSG00000008517
TCGA cBioPortalIL32
AceView (NCBI)IL32
Genatlas (Paris)IL32
WikiGenes9235
SOURCE (Princeton)IL32
Genetics Home Reference (NIH)IL32
Genomic and cartography
GoldenPath hg38 (UCSC)IL32  -     chr16:3065312-3069667 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL32  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblIL32 - 16p13.3 [CytoView hg19]  IL32 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIIL32 [Mapview hg19]  IL32 [Mapview hg38]
OMIM606001   
Gene and transcription
Genbank (Entrez)AK296143 AK307158 AK310053 AY495331 AY495332
RefSeq transcript (Entrez)NM_001012631 NM_001012632 NM_001012633 NM_001012634 NM_001012635 NM_001012636 NM_001012718 NM_001308078 NM_004221
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL32
Cluster EST : UnigeneHs.943 [ NCBI ]
CGAP (NCI)Hs.943
Alternative Splicing GalleryENSG00000008517
Gene ExpressionIL32 [ NCBI-GEO ]   IL32 [ EBI - ARRAY_EXPRESS ]   IL32 [ SEEK ]   IL32 [ MEM ]
Gene Expression Viewer (FireBrowse)IL32 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9235
GTEX Portal (Tissue expression)IL32
Protein : pattern, domain, 3D structure
UniProt/SwissProtP24001   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP24001  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP24001
Splice isoforms : SwissVarP24001
PhosPhoSitePlusP24001
Domains : Interpro (EBI)IL-32   
Domain families : Pfam (Sanger)IL32 (PF15225)   
Domain families : Pfam (NCBI)pfam15225   
Conserved Domain (NCBI)IL32
DMDM Disease mutations9235
Blocks (Seattle)IL32
SuperfamilyP24001
Human Protein AtlasENSG00000008517
Peptide AtlasP24001
HPRD09346
IPIIPI00386710   IPI00103009   IPI00816727   IPI00478532   IPI01021979   IPI01020858   IPI01022517   IPI01021798   IPI00943609   IPI00554483   IPI00978406   IPI00554453   
Protein Interaction databases
DIP (DOE-UCLA)P24001
IntAct (EBI)P24001
FunCoupENSG00000008517
BioGRIDIL32
STRING (EMBL)IL32
ZODIACIL32
Ontologies - Pathways
QuickGOP24001
Ontology : AmiGOcytokine activity  protein binding  extracellular space  cytosol  defense response  immune response  cell adhesion  membrane  
Ontology : EGO-EBIcytokine activity  protein binding  extracellular space  cytosol  defense response  immune response  cell adhesion  membrane  
NDEx NetworkIL32
Atlas of Cancer Signalling NetworkIL32
Wikipedia pathwaysIL32
Orthology - Evolution
OrthoDB9235
GeneTree (enSembl)ENSG00000008517
Phylogenetic Trees/Animal Genes : TreeFamIL32
HOVERGENP24001
HOGENOMP24001
Homologs : HomoloGeneIL32
Homology/Alignments : Family Browser (UCSC)IL32
Gene fusions - Rearrangements
Fusion : MitelmanNAA60/IL32 [16p13.3/16p13.3]  [t(16;16)(p13;p13)]  
Fusion: TCGANAA60 16p13.3 IL32 16p13.3 GBM
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL32 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL32
dbVarIL32
ClinVarIL32
1000_GenomesIL32 
Exome Variant ServerIL32
ExAC (Exome Aggregation Consortium)IL32 (select the gene name)
Genetic variants : HAPMAP9235
Genomic Variants (DGV)IL32 [DGVbeta]
DECIPHERIL32 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL32 
Mutations
ICGC Data PortalIL32 
TCGA Data PortalIL32 
Broad Tumor PortalIL32
OASIS PortalIL32 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL32  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL32
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL32
DgiDB (Drug Gene Interaction Database)IL32
DoCM (Curated mutations)IL32 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL32 (select a term)
intoGenIL32
Cancer3DIL32(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606001   
Orphanet
MedgenIL32
Genetic Testing Registry IL32
NextProtP24001 [Medical]
TSGene9235
GENETestsIL32
Huge Navigator IL32 [HugePedia]
snp3D : Map Gene to Disease9235
BioCentury BCIQIL32
ClinGenIL32
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9235
Chemical/Pharm GKB GenePA128395754
Clinical trialIL32
Miscellaneous
canSAR (ICR)IL32 (select the gene name)
Probes
Litterature
PubMed139 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL32
EVEXIL32
GoPubMedIL32
iHOPIL32
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:20:24 CEST 2017

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