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IL36G (interleukin 36, gamma)

Identity

Alias_namesIL1F9
interleukin 1 family
Alias_symbol (synonym)IL-1H1
IL-1RP2
IL-1F9
IL1H1
IL1E
Other aliasIL1RP2
HGNC (Hugo) IL36G
LocusID (NCBI) 56300
Atlas_Id 40951
Location 2q13  [Link to chromosome band 2q13]
Location_base_pair Starts at 113735596 and ends at 113743249 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL36G   15741
Cards
Entrez_Gene (NCBI)IL36G  56300  interleukin 36, gamma
AliasesIL-1F9; IL-1H1; IL-1RP2; IL1E; 
IL1F9; IL1H1; IL1RP2
GeneCards (Weizmann)IL36G
Ensembl hg19 (Hinxton)ENSG00000136688 [Gene_View]  chr2:113735596-113743249 [Contig_View]  IL36G [Vega]
Ensembl hg38 (Hinxton)ENSG00000136688 [Gene_View]  chr2:113735596-113743249 [Contig_View]  IL36G [Vega]
ICGC DataPortalENSG00000136688
TCGA cBioPortalIL36G
AceView (NCBI)IL36G
Genatlas (Paris)IL36G
WikiGenes56300
SOURCE (Princeton)IL36G
Genetics Home Reference (NIH)IL36G
Genomic and cartography
GoldenPath hg19 (UCSC)IL36G  -     chr2:113735596-113743249 +  2q13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IL36G  -     2q13   [Description]    (hg38-Dec_2013)
EnsemblIL36G - 2q13 [CytoView hg19]  IL36G - 2q13 [CytoView hg38]
Mapping of homologs : NCBIIL36G [Mapview hg19]  IL36G [Mapview hg38]
OMIM605542   
Gene and transcription
Genbank (Entrez)AF200492 AF206696 AY359111 BC096721 BC098130
RefSeq transcript (Entrez)NM_001278568 NM_019618
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929304
Consensus coding sequences : CCDS (NCBI)IL36G
Cluster EST : UnigeneHs.211238 [ NCBI ]
CGAP (NCI)Hs.211238
Alternative Splicing GalleryENSG00000136688
Gene ExpressionIL36G [ NCBI-GEO ]   IL36G [ EBI - ARRAY_EXPRESS ]   IL36G [ SEEK ]   IL36G [ MEM ]
Gene Expression Viewer (FireBrowse)IL36G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56300
GTEX Portal (Tissue expression)IL36G
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NZH8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NZH8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NZH8
Splice isoforms : SwissVarQ9NZH8
PhosPhoSitePlusQ9NZH8
Domains : Interpro (EBI)Cytokine_IL1-like    IL-1_fam    IL-1RA/IL-36   
Domain families : Pfam (Sanger)IL1 (PF00340)   
Domain families : Pfam (NCBI)pfam00340   
Conserved Domain (NCBI)IL36G
DMDM Disease mutations56300
Blocks (Seattle)IL36G
PDB (SRS)4IZE    4P0J    4P0K    4P0L   
PDB (PDBSum)4IZE    4P0J    4P0K    4P0L   
PDB (IMB)4IZE    4P0J    4P0K    4P0L   
PDB (RSDB)4IZE    4P0J    4P0K    4P0L   
Structural Biology KnowledgeBase4IZE    4P0J    4P0K    4P0L   
SCOP (Structural Classification of Proteins)4IZE    4P0J    4P0K    4P0L   
CATH (Classification of proteins structures)4IZE    4P0J    4P0K    4P0L   
SuperfamilyQ9NZH8
Human Protein AtlasENSG00000136688
Peptide AtlasQ9NZH8
HPRD05707
IPIIPI00021343   IPI00432063   IPI00917489   
Protein Interaction databases
DIP (DOE-UCLA)Q9NZH8
IntAct (EBI)Q9NZH8
FunCoupENSG00000136688
BioGRIDIL36G
STRING (EMBL)IL36G
ZODIACIL36G
Ontologies - Pathways
QuickGOQ9NZH8
Ontology : AmiGOcytokine activity  interleukin-1 receptor binding  extracellular region  extracellular space  inflammatory response  cell-cell signaling  cytokine-mediated signaling pathway  innate immune response  
Ontology : EGO-EBIcytokine activity  interleukin-1 receptor binding  extracellular region  extracellular space  inflammatory response  cell-cell signaling  cytokine-mediated signaling pathway  innate immune response  
NDEx NetworkIL36G
Atlas of Cancer Signalling NetworkIL36G
Wikipedia pathwaysIL36G
Orthology - Evolution
OrthoDB56300
GeneTree (enSembl)ENSG00000136688
Phylogenetic Trees/Animal Genes : TreeFamIL36G
HOVERGENQ9NZH8
HOGENOMQ9NZH8
Homologs : HomoloGeneIL36G
Homology/Alignments : Family Browser (UCSC)IL36G
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL36G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL36G
dbVarIL36G
ClinVarIL36G
1000_GenomesIL36G 
Exome Variant ServerIL36G
ExAC (Exome Aggregation Consortium)IL36G (select the gene name)
Genetic variants : HAPMAP56300
Genomic Variants (DGV)IL36G [DGVbeta]
DECIPHER (Syndromes)2:113735596-113743249  ENSG00000136688
CONAN: Copy Number AnalysisIL36G 
Mutations
ICGC Data PortalIL36G 
TCGA Data PortalIL36G 
Broad Tumor PortalIL36G
OASIS PortalIL36G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL36G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL36G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IL36G
DgiDB (Drug Gene Interaction Database)IL36G
DoCM (Curated mutations)IL36G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL36G (select a term)
intoGenIL36G
Cancer3DIL36G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605542   
Orphanet
MedgenIL36G
Genetic Testing Registry IL36G
NextProtQ9NZH8 [Medical]
TSGene56300
GENETestsIL36G
Huge Navigator IL36G [HugePedia]
snp3D : Map Gene to Disease56300
BioCentury BCIQIL36G
ClinGenIL36G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56300
Chemical/Pharm GKB GenePA38395
Clinical trialIL36G
Miscellaneous
canSAR (ICR)IL36G (select the gene name)
Probes
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL36G
EVEXIL36G
GoPubMedIL36G
iHOPIL36G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:05:09 CEST 2017

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