Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

IL9R (interleukin 9 receptor)

Identity

Other namesCD129
IL-9R
HGNC (Hugo) IL9R
LocusID (NCBI) 3581
Location Xq28
Location_base_pair Starts at 155227246 and ends at 155240482 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)IL9R   6030
Entrez_Gene (NCBI)IL9R  3581  interleukin 9 receptor
Cards
GeneCards (Weizmann)IL9R
Ensembl (Hinxton)ENSG00000124334 [Gene_View]  chrX:155227246-155240482 [Contig_View]  IL9R [Vega]
AceView (NCBI)IL9R
Genatlas (Paris)IL9R
SOURCE (Stanford)NM_002186 NM_176786
Genomic and cartography
GoldenPath (UCSC)IL9R  -  Xq28   chrX:155227246-155240482 +  Xq28   [Description]    (hg19-Feb_2009)
EnsemblIL9R - Xq28 [CytoView]
Mapping of homologs : NCBIIL9R [Mapview]
OMIM300007   
Gene and transcription
Genbank (Entrez)AK303178 BC025298 BC051337 HQ447710 M84747
RefSeq transcript (SRS)NM_002186 NM_176786
RefSeq transcript (Entrez)NM_002186 NM_176786
RefSeq genomic (SRS)AC_000155 NC_000023 NC_000024 NC_018934 NG_013238 NT_167198 NT_167206 NW_001842421 NW_004078126
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_000024 NC_018934 NG_013238 NT_167198 NT_167206 NW_001842421 NW_004078126
Consensus coding sequences : CCDS (NCBI)IL9R
Cluster EST : UnigeneHs.406228 [ SRS ] Hs.406228 [ NCBI ]
CGAP (NCI)Hs.406228
Alternative Splicing : Fast-db (Paris)GSHG0032983
Alternative Splicing GalleryENSG00000124334
Gene ExpressionIL9R [ NCBI-GEO ]   IL9R [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ01113 (SRS) Q01113 (Uniprot)
NextProtQ01113
With graphics : InterProQ01113
Splice isoforms : SwissVarQ01113(Swissvar)
Domaine pattern : Prosite (SRS)FN3 (PS50853)    HEMATOPO_REC_S_F1 (PS01355)   
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    HEMATOPO_REC_S_F1 (PS01355)   
Domains : Interpro (SRS)Fibronectin_type3    Hempt_rcpt_S_F1_CS    Ig-like_fold   
Domains : Interpro (EBI)Fibronectin_type3    Hempt_rcpt_S_F1_CS    Ig-like_fold   
Related proteins : CluSTrQ01113
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM3581
Blocks (Seattle)Q01113
Human Protein AtlasENSG00000124334
HPRD02052
IPIIPI00005954   IPI00956244   IPI00911029   IPI00328860   
Protein Interaction databases
DIP (DOE-UCLA)Q01113
IntAct (EBI)Q01113
FunCoupENSG00000124334
REACTOMEIL9R
Protein Interaction Database3581
BioGRIDIL9R
InParanoidQ01113
Interologous Interaction database Q01113
IntegromeDBIL9R
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)IL9R
SNP (GeneSNP Utah)IL9R
SNP : HGBaseIL9R
Genetic variants : HAPMAPIL9R
Somatic Mutations in Cancer : COSMICIL9R 
CONAN: Copy Number AnalysisIL9R 
Mutations and Diseases : HGMDIL9R
OMIM300007   
GENETests300007   
Disease Genetic AssociationIL9R
Huge Navigator IL9R [HugePedia]  IL9R [HugeCancerGEM]
Genomic VariantsIL9R  IL9R [DGVbeta]
snp3D : Map Gene to Disease3581
General knowledge
Homologs : HomoloGeneIL9R
Homology/Alignments : Family Browser (UCSC)IL9R
Phylogenetic Trees/Animal Genes : TreeFamIL9R
Chemical/Protein Interactions : CTD3581
Chemical/Pharm GKB GenePA29846
Clinical trialIL9R
Cancer Resource (Charite)ENSG00000124334
Ontology : AmiGOinterleukin-9 receptor activity  extracellular space  integral to plasma membrane  signal transduction  cell proliferation  interleukin-9-mediated signaling pathway  
Ontology : EGO-EBIinterleukin-9 receptor activity  extracellular space  integral to plasma membrane  signal transduction  cell proliferation  interleukin-9-mediated signaling pathway  
Pathways : KEGGCytokine-cytokine receptor interactionJak-STAT signaling pathwayHematopoietic cell lineage
Other databases
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
PubGeneIL9R
iHOPIL9R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:23:59 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.