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IL9R (interleukin 9 receptor)

Identity

Alias_symbol (synonym)CD129
Other aliasIL-9R
HGNC (Hugo) IL9R
LocusID (NCBI) 3581
Atlas_Id 50670
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 155997581 and ends at 156010817 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NUCB1 (19q13.33) / IL9R (Xq28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IL9R   6030
Cards
Entrez_Gene (NCBI)IL9R  3581  interleukin 9 receptor
AliasesCD129; IL-9R
GeneCards (Weizmann)IL9R
Ensembl hg19 (Hinxton)ENSG00000124334 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124334 [Gene_View]  chrX:155997581-156010817 [Contig_View]  IL9R [Vega]
ICGC DataPortalENSG00000124334
TCGA cBioPortalIL9R
AceView (NCBI)IL9R
Genatlas (Paris)IL9R
WikiGenes3581
SOURCE (Princeton)IL9R
Genetics Home Reference (NIH)IL9R
Genomic and cartography
GoldenPath hg38 (UCSC)IL9R  -     chrX:155997581-156010817 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IL9R  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblIL9R - Xq28 [CytoView hg19]  IL9R - Xq28 [CytoView hg38]
Mapping of homologs : NCBIIL9R [Mapview hg19]  IL9R [Mapview hg38]
OMIM300007   
Gene and transcription
Genbank (Entrez)AK303178 BC025298 BC051337 HQ447710 M84747
RefSeq transcript (Entrez)NM_002186 NM_176786
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IL9R
Cluster EST : UnigeneHs.406228 [ NCBI ]
CGAP (NCI)Hs.406228
Alternative Splicing GalleryENSG00000124334
Gene ExpressionIL9R [ NCBI-GEO ]   IL9R [ EBI - ARRAY_EXPRESS ]   IL9R [ SEEK ]   IL9R [ MEM ]
Gene Expression Viewer (FireBrowse)IL9R [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3581
GTEX Portal (Tissue expression)IL9R
Human Protein AtlasENSG00000124334-IL9R [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ01113   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ01113  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ01113
Splice isoforms : SwissVarQ01113
PhosPhoSitePlusQ01113
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    HEMATOPO_REC_S_F1 (PS01355)   
Domains : Interpro (EBI)FN3_dom    Hempt_rcpt_S_F1_CS    Ig-like_fold   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IL9R
DMDM Disease mutations3581
Blocks (Seattle)IL9R
SuperfamilyQ01113
Human Protein Atlas [tissue]ENSG00000124334-IL9R [tissue]
Peptide AtlasQ01113
HPRD02052
IPIIPI00005954   IPI00956244   IPI00911029   IPI00328860   
Protein Interaction databases
DIP (DOE-UCLA)Q01113
IntAct (EBI)Q01113
FunCoupENSG00000124334
BioGRIDIL9R
STRING (EMBL)IL9R
ZODIACIL9R
Ontologies - Pathways
QuickGOQ01113
Ontology : AmiGOinterleukin-9 receptor activity  extracellular space  plasma membrane  integral component of plasma membrane  signal transduction  cell proliferation  interleukin-9 binding  positive regulation of cell growth  interleukin-9-mediated signaling pathway  positive regulation of protein targeting to mitochondrion  
Ontology : EGO-EBIinterleukin-9 receptor activity  extracellular space  plasma membrane  integral component of plasma membrane  signal transduction  cell proliferation  interleukin-9 binding  positive regulation of cell growth  interleukin-9-mediated signaling pathway  positive regulation of protein targeting to mitochondrion  
Pathways : KEGGCytokine-cytokine receptor interaction    Jak-STAT signaling pathway    Hematopoietic cell lineage   
NDEx NetworkIL9R
Atlas of Cancer Signalling NetworkIL9R
Wikipedia pathwaysIL9R
Orthology - Evolution
OrthoDB3581
GeneTree (enSembl)ENSG00000124334
Phylogenetic Trees/Animal Genes : TreeFamIL9R
HOVERGENQ01113
HOGENOMQ01113
Homologs : HomoloGeneIL9R
Homology/Alignments : Family Browser (UCSC)IL9R
Gene fusions - Rearrangements
Tumor Fusion PortalIL9R
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIL9R [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IL9R
dbVarIL9R
ClinVarIL9R
1000_GenomesIL9R 
Exome Variant ServerIL9R
ExAC (Exome Aggregation Consortium)ENSG00000124334
GNOMAD BrowserENSG00000124334
Genetic variants : HAPMAP3581
Genomic Variants (DGV)IL9R [DGVbeta]
DECIPHERIL9R [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIL9R 
Mutations
ICGC Data PortalIL9R 
TCGA Data PortalIL9R 
Broad Tumor PortalIL9R
OASIS PortalIL9R [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIL9R  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIL9R
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch IL9R
DgiDB (Drug Gene Interaction Database)IL9R
DoCM (Curated mutations)IL9R (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IL9R (select a term)
intoGenIL9R
Cancer3DIL9R(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300007   
Orphanet
DisGeNETIL9R
MedgenIL9R
Genetic Testing Registry IL9R
NextProtQ01113 [Medical]
TSGene3581
GENETestsIL9R
Target ValidationIL9R
Huge Navigator IL9R [HugePedia]
snp3D : Map Gene to Disease3581
BioCentury BCIQIL9R
ClinGenIL9R
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3581
Chemical/Pharm GKB GenePA29846
Clinical trialIL9R
Miscellaneous
canSAR (ICR)IL9R (select the gene name)
Probes
Litterature
PubMed49 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIL9R
EVEXIL9R
GoPubMedIL9R
iHOPIL9R
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:17:47 CET 2017

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