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ILDR2 (immunoglobulin like domain containing receptor 2)

Identity

Alias_namesC1orf32
chromosome 1 open reading frame 32
immunoglobulin-like domain containing receptor 2
Other aliasdJ782G3.1
HGNC (Hugo) ILDR2
LocusID (NCBI) 387597
Atlas_Id 64603
Location 1q24.1  [Link to chromosome band 1q24]
Location_base_pair Starts at 166913204 and ends at 166975324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PBX1 (1q23.3) / ILDR2 (1q24.1)RAB3GAP1 (2q21.3) / ILDR2 (1q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ILDR2   18131
Cards
Entrez_Gene (NCBI)ILDR2  387597  immunoglobulin like domain containing receptor 2
AliasesC1orf32; dJ782G3.1
GeneCards (Weizmann)ILDR2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:166913204-166975324 [Contig_View]  ILDR2 [Vega]
TCGA cBioPortalILDR2
AceView (NCBI)ILDR2
Genatlas (Paris)ILDR2
WikiGenes387597
SOURCE (Princeton)ILDR2
Genetics Home Reference (NIH)ILDR2
Genomic and cartography
GoldenPath hg38 (UCSC)ILDR2  -     chr1:166913204-166975324 -  1q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ILDR2  -     1q24.1   [Description]    (hg19-Feb_2009)
EnsemblILDR2 - 1q24.1 [CytoView hg19]  ILDR2 - 1q24.1 [CytoView hg38]
Mapping of homologs : NCBIILDR2 [Mapview hg19]  ILDR2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF503509 BC148432 DQ980599 DQ980600
RefSeq transcript (Entrez)NM_199351
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ILDR2
Cluster EST : UnigeneHs.444835 [ NCBI ]
CGAP (NCI)Hs.444835
Gene ExpressionILDR2 [ NCBI-GEO ]   ILDR2 [ EBI - ARRAY_EXPRESS ]   ILDR2 [ SEEK ]   ILDR2 [ MEM ]
Gene Expression Viewer (FireBrowse)ILDR2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387597
GTEX Portal (Tissue expression)ILDR2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ71H61   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ71H61  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ71H61
Splice isoforms : SwissVarQ71H61
PhosPhoSitePlusQ71H61
Domains : Interpro (EBI)Ig-like_dom    Ig-like_fold    Ig_sub    LISCH7   
Domain families : Pfam (Sanger)LSR (PF05624)   
Domain families : Pfam (NCBI)pfam05624   
Domain families : Smart (EMBL)IG (SM00409)  
Conserved Domain (NCBI)ILDR2
DMDM Disease mutations387597
Blocks (Seattle)ILDR2
SuperfamilyQ71H61
Peptide AtlasQ71H61
HPRD12724
IPIIPI00414927   IPI00983363   IPI00977457   IPI00981443   IPI00980763   IPI00982105   IPI00977973   
Protein Interaction databases
DIP (DOE-UCLA)Q71H61
IntAct (EBI)Q71H61
BioGRIDILDR2
STRING (EMBL)ILDR2
ZODIACILDR2
Ontologies - Pathways
QuickGOQ71H61
Ontology : AmiGOendoplasmic reticulum membrane  response to glucose  integral component of membrane  insulin secretion  cell differentiation  pancreas development  homeostasis of number of cells within a tissue  
Ontology : EGO-EBIendoplasmic reticulum membrane  response to glucose  integral component of membrane  insulin secretion  cell differentiation  pancreas development  homeostasis of number of cells within a tissue  
NDEx NetworkILDR2
Atlas of Cancer Signalling NetworkILDR2
Wikipedia pathwaysILDR2
Orthology - Evolution
OrthoDB387597
Phylogenetic Trees/Animal Genes : TreeFamILDR2
HOVERGENQ71H61
HOGENOMQ71H61
Homologs : HomoloGeneILDR2
Homology/Alignments : Family Browser (UCSC)ILDR2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerILDR2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ILDR2
dbVarILDR2
ClinVarILDR2
1000_GenomesILDR2 
Exome Variant ServerILDR2
ExAC (Exome Aggregation Consortium)ILDR2 (select the gene name)
Genetic variants : HAPMAP387597
Genomic Variants (DGV)ILDR2 [DGVbeta]
DECIPHERILDR2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisILDR2 
Mutations
ICGC Data PortalILDR2 
TCGA Data PortalILDR2 
Broad Tumor PortalILDR2
OASIS PortalILDR2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICILDR2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDILDR2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ILDR2
DgiDB (Drug Gene Interaction Database)ILDR2
DoCM (Curated mutations)ILDR2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ILDR2 (select a term)
intoGenILDR2
Cancer3DILDR2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenILDR2
Genetic Testing Registry ILDR2
NextProtQ71H61 [Medical]
TSGene387597
GENETestsILDR2
Target ValidationILDR2
Huge Navigator ILDR2 [HugePedia]
snp3D : Map Gene to Disease387597
BioCentury BCIQILDR2
ClinGenILDR2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387597
Chemical/Pharm GKB GenePA164720916
Clinical trialILDR2
Miscellaneous
canSAR (ICR)ILDR2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineILDR2
EVEXILDR2
GoPubMedILDR2
iHOPILDR2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:27 CEST 2017

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