Atlas of Genetics and Cytogenetics in Oncology and Haematology


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INAFM1 (InaF-motif containing 1)

Identity

Alias_namesPRR24
proline rich 24
Other alias
HGNC (Hugo) INAFM1
LocusID (NCBI) 255783
Atlas_Id 64614
Location 19q13.32  [Link to chromosome band 19q13]
Location_base_pair Starts at 47778142 and ends at 47778980 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
INAFM1 (19q13.32) / RPSA (3p22.1)TPM4 (19p13.12) / INAFM1 (19q13.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INAFM1   27406
Cards
Entrez_Gene (NCBI)INAFM1  255783  InaF-motif containing 1
AliasesPRR24
GeneCards (Weizmann)INAFM1
Ensembl hg19 (Hinxton) [Gene_View]  chr19:47778142-47778980 [Contig_View]  INAFM1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:47778142-47778980 [Contig_View]  INAFM1 [Vega]
TCGA cBioPortalINAFM1
AceView (NCBI)INAFM1
Genatlas (Paris)INAFM1
WikiGenes255783
SOURCE (Princeton)INAFM1
Genetics Home Reference (NIH)INAFM1
Genomic and cartography
GoldenPath hg19 (UCSC)INAFM1  -     chr19:47778142-47778980 +  19q13.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)INAFM1  -     19q13.32   [Description]    (hg38-Dec_2013)
EnsemblINAFM1 - 19q13.32 [CytoView hg19]  INAFM1 - 19q13.32 [CytoView hg38]
Mapping of homologs : NCBIINAFM1 [Mapview hg19]  INAFM1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC022076 BC045749 BC064510 BE896741 BQ708656
RefSeq transcript (Entrez)NM_178511
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)INAFM1
Cluster EST : UnigeneHs.128690 [ NCBI ]
CGAP (NCI)Hs.128690
Gene ExpressionINAFM1 [ NCBI-GEO ]   INAFM1 [ EBI - ARRAY_EXPRESS ]   INAFM1 [ SEEK ]   INAFM1 [ MEM ]
Gene Expression Viewer (FireBrowse)INAFM1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)255783
GTEX Portal (Tissue expression)INAFM1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)INAFM1
DMDM Disease mutations255783
Blocks (Seattle)INAFM1
IPIIPI00647297   
Protein Interaction databases
BioGRIDINAFM1
STRING (EMBL)INAFM1
ZODIACINAFM1
Ontologies - Pathways
Huge Navigator INAFM1 [HugePedia]
snp3D : Map Gene to Disease255783
BioCentury BCIQINAFM1
ClinGenINAFM1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255783
Chemical/Pharm GKB GenePA165394234
Clinical trialINAFM1
Miscellaneous
canSAR (ICR)INAFM1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINAFM1
EVEXINAFM1
GoPubMedINAFM1
iHOPINAFM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:50 CET 2017

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