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INCENP (inner centromere protein)

Identity

Alias_namesinner centromere protein antigens (135kD, 155kD)
inner centromere protein antigens 135/155kDa
Alias_symbol (synonym)FLJ31633
Other alias-
HGNC (Hugo) INCENP
LocusID (NCBI) 3619
Atlas_Id 43317
Location 11q12.3  [Link to chromosome band 11q12]
Location_base_pair Starts at 62123973 and ends at 62153163 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INCENP   6058
Cards
Entrez_Gene (NCBI)INCENP  3619  inner centromere protein
Aliases
GeneCards (Weizmann)INCENP
Ensembl hg19 (Hinxton)ENSG00000149503 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149503 [Gene_View]  chr11:62123973-62153163 [Contig_View]  INCENP [Vega]
ICGC DataPortalENSG00000149503
TCGA cBioPortalINCENP
AceView (NCBI)INCENP
Genatlas (Paris)INCENP
WikiGenes3619
SOURCE (Princeton)INCENP
Genetics Home Reference (NIH)INCENP
Genomic and cartography
GoldenPath hg38 (UCSC)INCENP  -     chr11:62123973-62153163 +  11q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)INCENP  -     11q12.3   [Description]    (hg19-Feb_2009)
EnsemblINCENP - 11q12.3 [CytoView hg19]  INCENP - 11q12.3 [CytoView hg38]
Mapping of homologs : NCBIINCENP [Mapview hg19]  INCENP [Mapview hg38]
OMIM604411   
Gene and transcription
Genbank (Entrez)AF282265 AK056195 AK307633 AK310714 AW839685
RefSeq transcript (Entrez)NM_001040694 NM_020238
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)INCENP
Cluster EST : UnigeneHs.142179 [ NCBI ]
CGAP (NCI)Hs.142179
Alternative Splicing GalleryENSG00000149503
Gene ExpressionINCENP [ NCBI-GEO ]   INCENP [ EBI - ARRAY_EXPRESS ]   INCENP [ SEEK ]   INCENP [ MEM ]
Gene Expression Viewer (FireBrowse)INCENP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3619
GTEX Portal (Tissue expression)INCENP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NQS7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NQS7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NQS7
Splice isoforms : SwissVarQ9NQS7
PhosPhoSitePlusQ9NQS7
Domains : Interpro (EBI)INCENP_N    Inner_centromere_prot_ARK-bd   
Domain families : Pfam (Sanger)INCENP_ARK-bind (PF03941)    INCENP_N (PF12178)   
Domain families : Pfam (NCBI)pfam03941    pfam12178   
Conserved Domain (NCBI)INCENP
DMDM Disease mutations3619
Blocks (Seattle)INCENP
PDB (SRS)2QFA    4AF3    5IEH    5IEK   
PDB (PDBSum)2QFA    4AF3    5IEH    5IEK   
PDB (IMB)2QFA    4AF3    5IEH    5IEK   
PDB (RSDB)2QFA    4AF3    5IEH    5IEK   
Structural Biology KnowledgeBase2QFA    4AF3    5IEH    5IEK   
SCOP (Structural Classification of Proteins)2QFA    4AF3    5IEH    5IEK   
CATH (Classification of proteins structures)2QFA    4AF3    5IEH    5IEK   
SuperfamilyQ9NQS7
Human Protein AtlasENSG00000149503
Peptide AtlasQ9NQS7
HPRD05103
IPIIPI00876972   IPI00759472   IPI00983394   
Protein Interaction databases
DIP (DOE-UCLA)Q9NQS7
IntAct (EBI)Q9NQS7
FunCoupENSG00000149503
BioGRIDINCENP
STRING (EMBL)INCENP
ZODIACINCENP
Ontologies - Pathways
QuickGOQ9NQS7
Ontology : AmiGOchromosome, centromeric region  kinetochore  condensed chromosome kinetochore  lateral element  central element  cytokinesis  protein binding  nucleus  nucleoplasm  pericentric heterochromatin  spindle  cytosol  cytosol  microtubule  chromosome segregation  sister chromatid cohesion  chromocenter  nuclear body  protein sumoylation  midbody  protein complex  
Ontology : EGO-EBIchromosome, centromeric region  kinetochore  condensed chromosome kinetochore  lateral element  central element  cytokinesis  protein binding  nucleus  nucleoplasm  pericentric heterochromatin  spindle  cytosol  cytosol  microtubule  chromosome segregation  sister chromatid cohesion  chromocenter  nuclear body  protein sumoylation  midbody  protein complex  
NDEx NetworkINCENP
Atlas of Cancer Signalling NetworkINCENP
Wikipedia pathwaysINCENP
Orthology - Evolution
OrthoDB3619
GeneTree (enSembl)ENSG00000149503
Phylogenetic Trees/Animal Genes : TreeFamINCENP
HOVERGENQ9NQS7
HOGENOMQ9NQS7
Homologs : HomoloGeneINCENP
Homology/Alignments : Family Browser (UCSC)INCENP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINCENP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INCENP
dbVarINCENP
ClinVarINCENP
1000_GenomesINCENP 
Exome Variant ServerINCENP
ExAC (Exome Aggregation Consortium)INCENP (select the gene name)
Genetic variants : HAPMAP3619
Genomic Variants (DGV)INCENP [DGVbeta]
DECIPHERINCENP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisINCENP 
Mutations
ICGC Data PortalINCENP 
TCGA Data PortalINCENP 
Broad Tumor PortalINCENP
OASIS PortalINCENP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICINCENP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDINCENP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch INCENP
DgiDB (Drug Gene Interaction Database)INCENP
DoCM (Curated mutations)INCENP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INCENP (select a term)
intoGenINCENP
Cancer3DINCENP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604411   
Orphanet
MedgenINCENP
Genetic Testing Registry INCENP
NextProtQ9NQS7 [Medical]
TSGene3619
GENETestsINCENP
Target ValidationINCENP
Huge Navigator INCENP [HugePedia]
snp3D : Map Gene to Disease3619
BioCentury BCIQINCENP
ClinGenINCENP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3619
Chemical/Pharm GKB GenePA29868
Clinical trialINCENP
Miscellaneous
canSAR (ICR)INCENP (select the gene name)
Probes
Litterature
PubMed68 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINCENP
EVEXINCENP
GoPubMedINCENP
iHOPINCENP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:04:03 CEST 2017

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