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INE1 (inactivation escape 1 (non-protein coding))

Identity

Alias_symbol (synonym)NCRNA00010
Other alias
HGNC (Hugo) INE1
LocusID (NCBI) 8552
Atlas_Id 46743
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 47064326 and ends at 47065249 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INE1   6060
Cards
Entrez_Gene (NCBI)INE1  8552  inactivation escape 1 (non-protein coding)
AliasesNCRNA00010
GeneCards (Weizmann)INE1
Ensembl hg19 (Hinxton)ENSG00000224975 [Gene_View]  chrX:47064326-47065249 [Contig_View]  INE1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000224975 [Gene_View]  chrX:47064326-47065249 [Contig_View]  INE1 [Vega]
ICGC DataPortalENSG00000224975
TCGA cBioPortalINE1
AceView (NCBI)INE1
Genatlas (Paris)INE1
WikiGenes8552
SOURCE (Princeton)INE1
Genetics Home Reference (NIH)INE1
Genomic and cartography
GoldenPath hg19 (UCSC)INE1  -     chrX:47064326-47065249 +  Xp11.23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)INE1  -     Xp11.23   [Description]    (hg38-Dec_2013)
EnsemblINE1 - Xp11.23 [CytoView hg19]  INE1 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIINE1 [Mapview hg19]  INE1 [Mapview hg38]
OMIM300164   
Gene and transcription
Genbank (Entrez)BC069671 BC069696 BC069772 BC112149 BC112175
RefSeq transcript (Entrez)NM_003669
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_009161 NG_021353 NT_079573 NW_004929439
Consensus coding sequences : CCDS (NCBI)INE1
Cluster EST : UnigeneHs.657350 [ NCBI ]
CGAP (NCI)Hs.657350
Alternative Splicing GalleryENSG00000224975
Gene ExpressionINE1 [ NCBI-GEO ]   INE1 [ EBI - ARRAY_EXPRESS ]   INE1 [ SEEK ]   INE1 [ MEM ]
Gene Expression Viewer (FireBrowse)INE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8552
GTEX Portal (Tissue expression)INE1
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15225   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15225  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15225
Splice isoforms : SwissVarO15225
PhosPhoSitePlusO15225
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)INE1
DMDM Disease mutations8552
Blocks (Seattle)INE1
SuperfamilyO15225
Human Protein AtlasENSG00000224975
Peptide AtlasO15225
HPRD02158
IPIIPI00005674   IPI00977116   
Protein Interaction databases
DIP (DOE-UCLA)O15225
IntAct (EBI)O15225
FunCoupENSG00000224975
BioGRIDINE1
STRING (EMBL)INE1
ZODIACINE1
Ontologies - Pathways
QuickGOO15225
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkINE1
Atlas of Cancer Signalling NetworkINE1
Wikipedia pathwaysINE1
Orthology - Evolution
OrthoDB8552
GeneTree (enSembl)ENSG00000224975
Phylogenetic Trees/Animal Genes : TreeFamINE1
HOVERGENO15225
HOGENOMO15225
Homologs : HomoloGeneINE1
Homology/Alignments : Family Browser (UCSC)INE1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INE1
dbVarINE1
ClinVarINE1
1000_GenomesINE1 
Exome Variant ServerINE1
ExAC (Exome Aggregation Consortium)INE1 (select the gene name)
Genetic variants : HAPMAP8552
Genomic Variants (DGV)INE1 [DGVbeta]
DECIPHER (Syndromes)X:47064326-47065249  ENSG00000224975
CONAN: Copy Number AnalysisINE1 
Mutations
ICGC Data PortalINE1 
TCGA Data PortalINE1 
Broad Tumor PortalINE1
OASIS PortalINE1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICINE1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDINE1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch INE1
DgiDB (Drug Gene Interaction Database)INE1
DoCM (Curated mutations)INE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INE1 (select a term)
intoGenINE1
Cancer3DINE1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300164   
Orphanet
MedgenINE1
Genetic Testing Registry INE1
NextProtO15225 [Medical]
TSGene8552
GENETestsINE1
Huge Navigator INE1 [HugePedia]
snp3D : Map Gene to Disease8552
BioCentury BCIQINE1
ClinGenINE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8552
Chemical/Pharm GKB GenePA29870
Clinical trialINE1
Miscellaneous
canSAR (ICR)INE1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINE1
EVEXINE1
GoPubMedINE1
iHOPINE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:05:15 CEST 2017

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