Atlas of Genetics and Cytogenetics in Oncology and Haematology

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INKA2 (inka box actin regulator 2)

Identity

Alias (NCBI)C1orf183
FAM212B
HGNC (Hugo) INKA2
LocusID (NCBI) 55924
Atlas_Id 80630
Location 1p13.2  [Link to chromosome band 1p13]
Location_base_pair Starts at 111722064 and ends at 111755797 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)INKA2   28045
Cards
Entrez_Gene (NCBI)INKA2    inka box actin regulator 2
AliasesC1orf183; FAM212B
GeneCards (Weizmann)INKA2
Ensembl hg19 (Hinxton)ENSG00000197852 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197852 [Gene_View]  ENSG00000197852 [Sequence]  chr1:111722064-111755797 [Contig_View]  INKA2 [Vega]
ICGC DataPortalENSG00000197852
TCGA cBioPortalINKA2
AceView (NCBI)INKA2
Genatlas (Paris)INKA2
SOURCE (Princeton)INKA2
Genetics Home Reference (NIH)INKA2
Genomic and cartography
GoldenPath hg38 (UCSC)INKA2  -     chr1:111722064-111755797 -  1p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)INKA2  -     1p13.2   [Description]    (hg19-Feb_2009)
GoldenPathINKA2 - 1p13.2 [CytoView hg19]  INKA2 - 1p13.2 [CytoView hg38]
ImmunoBaseENSG00000197852
genome Data Viewer NCBIINKA2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK055667 AK092074 AK094997 AK293989 AK295012
RefSeq transcript (Entrez)NM_019099 NM_198926
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)INKA2
Alternative Splicing GalleryENSG00000197852
Gene ExpressionINKA2 [ NCBI-GEO ]   INKA2 [ EBI - ARRAY_EXPRESS ]   INKA2 [ SEEK ]   INKA2 [ MEM ]
Gene Expression Viewer (FireBrowse)INKA2 [ Firebrowse - Broad ]
GenevisibleExpression of INKA2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55924
GTEX Portal (Tissue expression)INKA2
Human Protein AtlasENSG00000197852-INKA2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NTI7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NTI7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NTI7
Splice isoforms : SwissVarQ9NTI7
PhosPhoSitePlusQ9NTI7
Domains : Interpro (EBI)FAM212    Inka   
Domain families : Pfam (Sanger)FAM212 (PF15342)   
Domain families : Pfam (NCBI)pfam15342   
Conserved Domain (NCBI)INKA2
Blocks (Seattle)INKA2
SuperfamilyQ9NTI7
Human Protein Atlas [tissue]ENSG00000197852-INKA2 [tissue]
Peptide AtlasQ9NTI7
IPIIPI00005176   IPI00396182   IPI00981024   IPI00909526   IPI00983457   
Protein Interaction databases
DIP (DOE-UCLA)Q9NTI7
IntAct (EBI)Q9NTI7
BioGRIDINKA2
STRING (EMBL)INKA2
ZODIACINKA2
Ontologies - Pathways
QuickGOQ9NTI7
Ontology : AmiGOnucleus  nucleus  nucleoplasm  protein kinase binding  protein kinase binding  protein serine/threonine kinase inhibitor activity  protein serine/threonine kinase inhibitor activity  negative regulation of protein serine/threonine kinase activity  
Ontology : EGO-EBInucleus  nucleus  nucleoplasm  protein kinase binding  protein kinase binding  protein serine/threonine kinase inhibitor activity  protein serine/threonine kinase inhibitor activity  negative regulation of protein serine/threonine kinase activity  
NDEx NetworkINKA2
Atlas of Cancer Signalling NetworkINKA2
Wikipedia pathwaysINKA2
Orthology - Evolution
OrthoDB55924
GeneTree (enSembl)ENSG00000197852
Phylogenetic Trees/Animal Genes : TreeFamINKA2
HOGENOMQ9NTI7
Homologs : HomoloGeneINKA2
Homology/Alignments : Family Browser (UCSC)INKA2
Gene fusions - Rearrangements
Fusion : QuiverINKA2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINKA2 [hg38]
dbVarINKA2
ClinVarINKA2
MonarchINKA2
1000_GenomesINKA2 
Exome Variant ServerINKA2
GNOMAD BrowserENSG00000197852
Varsome BrowserINKA2
Genomic Variants (DGV)INKA2 [DGVbeta]
DECIPHERINKA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisINKA2 
Mutations
ICGC Data PortalINKA2 
TCGA Data PortalINKA2 
Broad Tumor PortalINKA2
OASIS PortalINKA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICINKA2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DINKA2
Mutations and Diseases : HGMDINKA2
BioMutasearch INKA2
DgiDB (Drug Gene Interaction Database)INKA2
DoCM (Curated mutations)INKA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INKA2 (select a term)
intoGenINKA2
Cancer3DINKA2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETINKA2
MedgenINKA2
Genetic Testing Registry INKA2
NextProtQ9NTI7 [Medical]
GENETestsINKA2
Target ValidationINKA2
Huge Navigator INKA2 [HugePedia]
ClinGenINKA2
Clinical trials, drugs, therapy
MyCancerGenomeINKA2
Protein Interactions : CTD
Pharm GKB GenePA142672431
Clinical trialINKA2
Miscellaneous
canSAR (ICR)INKA2 (select the gene name)
HarmonizomeINKA2
DataMed IndexINKA2
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINKA2
EVEXINKA2
GoPubMedINKA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 16:57:52 CET 2020
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