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INMT (indolethylamine N-methyltransferase)

Identity

Other aliasTEMT
HGNC (Hugo) INMT
LocusID (NCBI) 11185
Atlas_Id 64619
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 30752135 and ends at 30757602 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INMT   6069
Cards
Entrez_Gene (NCBI)INMT  11185  indolethylamine N-methyltransferase
AliasesTEMT
GeneCards (Weizmann)INMT
Ensembl hg19 (Hinxton)ENSG00000241644 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241644 [Gene_View]  chr7:30752135-30757602 [Contig_View]  INMT [Vega]
ICGC DataPortalENSG00000241644
TCGA cBioPortalINMT
AceView (NCBI)INMT
Genatlas (Paris)INMT
WikiGenes11185
SOURCE (Princeton)INMT
Genetics Home Reference (NIH)INMT
Genomic and cartography
GoldenPath hg38 (UCSC)INMT  -     chr7:30752135-30757602 +  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)INMT  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblINMT - 7p14.3 [CytoView hg19]  INMT - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIINMT [Mapview hg19]  INMT [Mapview hg38]
OMIM604854   
Gene and transcription
Genbank (Entrez)AF128846 AF128847 AK309519 AK313832 BC033813
RefSeq transcript (Entrez)NM_001199219 NM_006774
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)INMT
Cluster EST : UnigeneHs.632629 [ NCBI ]
CGAP (NCI)Hs.632629
Alternative Splicing GalleryENSG00000241644
Gene ExpressionINMT [ NCBI-GEO ]   INMT [ EBI - ARRAY_EXPRESS ]   INMT [ SEEK ]   INMT [ MEM ]
Gene Expression Viewer (FireBrowse)INMT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11185
GTEX Portal (Tissue expression)INMT
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95050   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95050  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95050
Splice isoforms : SwissVarO95050
Catalytic activity : Enzyme2.1.1.49 [ Enzyme-Expasy ]   2.1.1.492.1.1.49 [ IntEnz-EBI ]   2.1.1.49 [ BRENDA ]   2.1.1.49 [ KEGG ]   
PhosPhoSitePlusO95050
Domaine pattern : Prosite (Expaxy)NNMT_PNMT_TEMT (PS01100)    SAM_MT_NNMT_PNMT_TEMT (PS51681)   
Domains : Interpro (EBI)NNMT/PNMT/TEMT_CS    NNMT_TEMT_trans    SAM-dependent_MTases   
Domain families : Pfam (Sanger)NNMT_PNMT_TEMT (PF01234)   
Domain families : Pfam (NCBI)pfam01234   
Conserved Domain (NCBI)INMT
DMDM Disease mutations11185
Blocks (Seattle)INMT
PDB (SRS)2A14   
PDB (PDBSum)2A14   
PDB (IMB)2A14   
PDB (RSDB)2A14   
Structural Biology KnowledgeBase2A14   
SCOP (Structural Classification of Proteins)2A14   
CATH (Classification of proteins structures)2A14   
SuperfamilyO95050
Human Protein AtlasENSG00000241644
Peptide AtlasO95050
HPRD06890
IPIIPI00028239   IPI00916705   
Protein Interaction databases
DIP (DOE-UCLA)O95050
IntAct (EBI)O95050
FunCoupENSG00000241644
BioGRIDINMT
STRING (EMBL)INMT
ZODIACINMT
Ontologies - Pathways
QuickGOO95050
Ontology : AmiGOthioether S-methyltransferase activity  protein binding  cytosol  amine metabolic process  response to toxic substance  amine N-methyltransferase activity  methylation  
Ontology : EGO-EBIthioether S-methyltransferase activity  protein binding  cytosol  amine metabolic process  response to toxic substance  amine N-methyltransferase activity  methylation  
Pathways : KEGGTryptophan metabolism    Selenocompound metabolism   
NDEx NetworkINMT
Atlas of Cancer Signalling NetworkINMT
Wikipedia pathwaysINMT
Orthology - Evolution
OrthoDB11185
GeneTree (enSembl)ENSG00000241644
Phylogenetic Trees/Animal Genes : TreeFamINMT
HOVERGENO95050
HOGENOMO95050
Homologs : HomoloGeneINMT
Homology/Alignments : Family Browser (UCSC)INMT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINMT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INMT
dbVarINMT
ClinVarINMT
1000_GenomesINMT 
Exome Variant ServerINMT
ExAC (Exome Aggregation Consortium)INMT (select the gene name)
Genetic variants : HAPMAP11185
Genomic Variants (DGV)INMT [DGVbeta]
DECIPHERINMT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisINMT 
Mutations
ICGC Data PortalINMT 
TCGA Data PortalINMT 
Broad Tumor PortalINMT
OASIS PortalINMT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICINMT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDINMT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch INMT
DgiDB (Drug Gene Interaction Database)INMT
DoCM (Curated mutations)INMT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INMT (select a term)
intoGenINMT
Cancer3DINMT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604854   
Orphanet
MedgenINMT
Genetic Testing Registry INMT
NextProtO95050 [Medical]
TSGene11185
GENETestsINMT
Target ValidationINMT
Huge Navigator INMT [HugePedia]
snp3D : Map Gene to Disease11185
BioCentury BCIQINMT
ClinGenINMT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11185
Chemical/Pharm GKB GenePA403
Clinical trialINMT
Miscellaneous
canSAR (ICR)INMT (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINMT
EVEXINMT
GoPubMedINMT
iHOPINMT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:13 CEST 2017

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