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INS-IGF2 (INS-IGF2 readthrough)

Identity

Other aliasINSIGF
HGNC (Hugo) INS-IGF2
LocusID (NCBI) 723961
Atlas_Id 64623
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 2167853 and ends at 2182439 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
AXL (19q13.2) / INS-IGF2 (11p15.5)CD276 (15q24.1) / INS-IGF2 (11p15.5)CFAP74 (1p36.33) / INS-IGF2 (11p15.5)
GSK3B (3q13.33) / INS-IGF2 (11p15.5)HNRNPA2B1 (7p15.2) / INS-IGF2 (11p15.5)IFT140 (16p13.3) / INS-IGF2 (11p15.5)
IGFBP4 (17q21.2) / INS-IGF2 (11p15.5)INS-IGF2 (11p15.5) / ALDOB (9q31.1)INS-IGF2 (11p15.5) / COL12A1 (6q13)
INS-IGF2 (11p15.5) / GSK3B (3q13.33)INS-IGF2 (11p15.5) / HEMGN (9q22.33)INS-IGF2 (11p15.5) / HNRNPA2B1 (7p15.2)
INS-IGF2 (11p15.5) / IGF2 (11p15.5)INS-IGF2 (11p15.5) / INS-IGF2 (11p15.5)INS-IGF2 (11p15.5) / IPO9 (1q32.1)
INS-IGF2 (11p15.5) / LOC401093 ()INS-IGF2 (11p15.5) / MAGED2 (Xp11.21)INS-IGF2 (11p15.5) / MYH3 (17p13.1)
INS-IGF2 (11p15.5) / NDE1 (16p13.11)INS-IGF2 (11p15.5) / NPIPB7 (16q23.1)INS-IGF2 (11p15.5) / PLCB2 (15q15.1)
INS-IGF2 (11p15.5) / PLCD1 (3p22.2)INS-IGF2 (11p15.5) / PTPRD (9p24.1)INS-IGF2 (11p15.5) / RPL34 (4q25)
INS-IGF2 (11p15.5) / SQSTM1 (5q35.3)INS-IGF2 (11p15.5) / TAPBP (6p21.32)INS-IGF2 (11p15.5) / TM2D1 (1p31.3)
INS-IGF2 (11p15.5) / TTR (18q12.1)LEFTY1 (1q42.12) / INS-IGF2 (11p15.5)NUP214 (9q34.13) / INS-IGF2 (11p15.5)
P3H3 (12p13.31) / INS-IGF2 (11p15.5)PEA15 (1q23.2) / INS-IGF2 (11p15.5)PUM3 (9p24.2) / INS-IGF2 (11p15.5)
TMEM30A (6q14.1) / INS-IGF2 (11p15.5)UBLCP1 (5q33.3) / INS-IGF2 (11p15.5)YTHDC1 (4q13.2) / INS-IGF2 (11p15.5)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INS-IGF2   33527
Cards
Entrez_Gene (NCBI)INS-IGF2  723961  INS-IGF2 readthrough
AliasesINSIGF
GeneCards (Weizmann)INS-IGF2
Ensembl hg19 (Hinxton)ENSG00000129965 [Gene_View]  chr11:2167853-2182439 [Contig_View]  INS-IGF2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000129965 [Gene_View]  chr11:2167853-2182439 [Contig_View]  INS-IGF2 [Vega]
ICGC DataPortalENSG00000129965
TCGA cBioPortalINS-IGF2
AceView (NCBI)INS-IGF2
Genatlas (Paris)INS-IGF2
WikiGenes723961
SOURCE (Princeton)INS-IGF2
Genetics Home Reference (NIH)INS-IGF2
Genomic and cartography
GoldenPath hg19 (UCSC)INS-IGF2  -     chr11:2167853-2182439 -  11p15.5   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)INS-IGF2  -     11p15.5   [Description]    (hg38-Dec_2013)
EnsemblINS-IGF2 - 11p15.5 [CytoView hg19]  INS-IGF2 - 11p15.5 [CytoView hg38]
Mapping of homologs : NCBIINS-IGF2 [Mapview hg19]  INS-IGF2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI133461 AK291594 AL568676 AW878608 AW878688
RefSeq transcript (Entrez)NM_001042376
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)INS-IGF2
Cluster EST : UnigeneHs.716962 [ NCBI ]
CGAP (NCI)Hs.716962
Alternative Splicing GalleryENSG00000129965
Gene ExpressionINS-IGF2 [ NCBI-GEO ]   INS-IGF2 [ EBI - ARRAY_EXPRESS ]   INS-IGF2 [ SEEK ]   INS-IGF2 [ MEM ]
Gene Expression Viewer (FireBrowse)INS-IGF2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)723961
GTEX Portal (Tissue expression)INS-IGF2
Protein : pattern, domain, 3D structure
UniProt/SwissProtF8WCM5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtF8WCM5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProF8WCM5
Splice isoforms : SwissVarF8WCM5
PhosPhoSitePlusF8WCM5
Domains : Interpro (EBI)Insulin    Insulin-like   
Domain families : Pfam (Sanger)Insulin (PF00049)   
Domain families : Pfam (NCBI)pfam00049   
Domain families : Smart (EMBL)IlGF (SM00078)  
Conserved Domain (NCBI)INS-IGF2
DMDM Disease mutations723961
Blocks (Seattle)INS-IGF2
SuperfamilyF8WCM5
Human Protein AtlasENSG00000129965
Peptide AtlasF8WCM5
Protein Interaction databases
DIP (DOE-UCLA)F8WCM5
IntAct (EBI)F8WCM5
FunCoupENSG00000129965
BioGRIDINS-IGF2
STRING (EMBL)INS-IGF2
ZODIACINS-IGF2
Ontologies - Pathways
QuickGOF8WCM5
Ontology : AmiGOhormone activity  extracellular region  
Ontology : EGO-EBIhormone activity  extracellular region  
NDEx NetworkINS-IGF2
Atlas of Cancer Signalling NetworkINS-IGF2
Wikipedia pathwaysINS-IGF2
Orthology - Evolution
OrthoDB723961
GeneTree (enSembl)ENSG00000129965
Phylogenetic Trees/Animal Genes : TreeFamINS-IGF2
HOVERGENF8WCM5
HOGENOMF8WCM5
Homologs : HomoloGeneINS-IGF2
Homology/Alignments : Family Browser (UCSC)INS-IGF2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINS-IGF2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INS-IGF2
dbVarINS-IGF2
ClinVarINS-IGF2
1000_GenomesINS-IGF2 
Exome Variant ServerINS-IGF2
ExAC (Exome Aggregation Consortium)INS-IGF2 (select the gene name)
Genetic variants : HAPMAP723961
Genomic Variants (DGV)INS-IGF2 [DGVbeta]
DECIPHER (Syndromes)11:2167853-2182439  ENSG00000129965
CONAN: Copy Number AnalysisINS-IGF2 
Mutations
ICGC Data PortalINS-IGF2 
TCGA Data PortalINS-IGF2 
Broad Tumor PortalINS-IGF2
OASIS PortalINS-IGF2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICINS-IGF2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDINS-IGF2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch INS-IGF2
DgiDB (Drug Gene Interaction Database)INS-IGF2
DoCM (Curated mutations)INS-IGF2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INS-IGF2 (select a term)
intoGenINS-IGF2
Cancer3DINS-IGF2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenINS-IGF2
Genetic Testing Registry INS-IGF2
NextProtF8WCM5 [Medical]
TSGene723961
GENETestsINS-IGF2
Huge Navigator INS-IGF2 [HugePedia]
snp3D : Map Gene to Disease723961
BioCentury BCIQINS-IGF2
ClinGenINS-IGF2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD723961
Chemical/Pharm GKB GenePA162392175
Clinical trialINS-IGF2
Miscellaneous
canSAR (ICR)INS-IGF2 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINS-IGF2
EVEXINS-IGF2
GoPubMedINS-IGF2
iHOPINS-IGF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:52 CET 2017

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