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INTS10 (integrator complex subunit 10)

Identity

Alias (NCBI)C8orf35
INT10
HGNC (Hugo) INTS10
HGNC Alias symbFLJ10569
INT10
HGNC Previous nameC8orf35
HGNC Previous namechromosome 8 open reading frame 35
LocusID (NCBI) 55174
Atlas_Id 56972
Location 8p21.3  [Link to chromosome band 8p21]
Location_base_pair Starts at 19817416 and ends at 19852067 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FOSL2 (2p23.2) / INTS10 (8p21.3)INTS10 (8p21.3) / INTS10 (8p21.3)PDE4D (5q11.2) / INTS10 (8p21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)INTS10   25548
Cards
Entrez_Gene (NCBI)INTS10    integrator complex subunit 10
AliasesC8orf35; INT10
GeneCards (Weizmann)INTS10
Ensembl hg19 (Hinxton)ENSG00000104613 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104613 [Gene_View]  ENSG00000104613 [Sequence]  chr8:19817416-19852067 [Contig_View]  INTS10 [Vega]
ICGC DataPortalENSG00000104613
TCGA cBioPortalINTS10
AceView (NCBI)INTS10
Genatlas (Paris)INTS10
SOURCE (Princeton)INTS10
Genetics Home Reference (NIH)INTS10
Genomic and cartography
GoldenPath hg38 (UCSC)INTS10  -     chr8:19817416-19852067 +  8p21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)INTS10  -     8p21.3   [Description]    (hg19-Feb_2009)
GoldenPathINTS10 - 8p21.3 [CytoView hg19]  INTS10 - 8p21.3 [CytoView hg38]
ImmunoBaseENSG00000104613
Genome Data Viewer NCBIINTS10 [Mapview hg19]  
OMIM611353   
Gene and transcription
Genbank (Entrez)AI479676 AK001431 AK092931 AL442078 BC001915
RefSeq transcript (Entrez)NM_001353505 NM_001353506 NM_001353507 NM_001353508 NM_001353509 NM_001353510 NM_001353511 NM_001353512 NM_001353513 NM_001353514 NM_001353515 NM_001353516 NM_001353517 NM_001353518 NM_001353519 NM_001353520 NM_001353521 NM_001353522 NM_018142
Consensus coding sequences : CCDS (NCBI)INTS10
Gene ExpressionINTS10 [ NCBI-GEO ]   INTS10 [ EBI - ARRAY_EXPRESS ]   INTS10 [ SEEK ]   INTS10 [ MEM ]
Gene Expression Viewer (FireBrowse)INTS10 [ Firebrowse - Broad ]
GenevisibleExpression of INTS10 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55174
GTEX Portal (Tissue expression)INTS10
Human Protein AtlasENSG00000104613-INTS10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NVR2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NVR2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NVR2
PhosPhoSitePlusQ9NVR2
Domains : Interpro (EBI)Int_cplx_su10   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)INTS10
SuperfamilyQ9NVR2
AlphaFold pdb e-kbQ9NVR2   
Human Protein Atlas [tissue]ENSG00000104613-INTS10 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9NVR2
IntAct (EBI)Q9NVR2
BioGRIDINTS10
STRING (EMBL)INTS10
ZODIACINTS10
Ontologies - Pathways
QuickGOQ9NVR2
Ontology : AmiGOprotein binding  protein binding  nucleus  nucleoplasm  snRNA processing  snRNA processing  integrator complex  integrator complex  snRNA transcription by RNA polymerase II  
Ontology : EGO-EBIprotein binding  protein binding  nucleus  nucleoplasm  snRNA processing  snRNA processing  integrator complex  integrator complex  snRNA transcription by RNA polymerase II  
NDEx NetworkINTS10
Atlas of Cancer Signalling NetworkINTS10
Wikipedia pathwaysINTS10
Orthology - Evolution
OrthoDB55174
GeneTree (enSembl)ENSG00000104613
Phylogenetic Trees/Animal Genes : TreeFamINTS10
Homologs : HomoloGeneINTS10
Homology/Alignments : Family Browser (UCSC)INTS10
Gene fusions - Rearrangements
Fusion : QuiverINTS10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINTS10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INTS10
dbVarINTS10
ClinVarINTS10
MonarchINTS10
1000_GenomesINTS10 
Exome Variant ServerINTS10
GNOMAD BrowserENSG00000104613
Varsome BrowserINTS10
ACMGINTS10 variants
VarityQ9NVR2
Genomic Variants (DGV)INTS10 [DGVbeta]
DECIPHERINTS10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisINTS10 
Mutations
ICGC Data PortalINTS10 
TCGA Data PortalINTS10 
Broad Tumor PortalINTS10
OASIS PortalINTS10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICINTS10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DINTS10
Mutations and Diseases : HGMDINTS10
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaINTS10
DgiDB (Drug Gene Interaction Database)INTS10
DoCM (Curated mutations)INTS10
CIViC (Clinical Interpretations of Variants in Cancer)INTS10
Cancer3DINTS10
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611353   
Orphanet
DisGeNETINTS10
MedgenINTS10
Genetic Testing Registry INTS10
NextProtQ9NVR2 [Medical]
GENETestsINTS10
Target ValidationINTS10
Huge Navigator INTS10 [HugePedia]
ClinGenINTS10
Clinical trials, drugs, therapy
MyCancerGenomeINTS10
Protein Interactions : CTDINTS10
Pharm GKB GenePA142672354
PharosQ9NVR2
Clinical trialINTS10
Miscellaneous
canSAR (ICR)INTS10
HarmonizomeINTS10
DataMed IndexINTS10
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXINTS10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:14:04 CEST 2021

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