Atlas of Genetics and Cytogenetics in Oncology and Haematology


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INTS6-AS1 (INTS6 antisense RNA 1)

Identity

Alias_namesINTS6 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) INTS6-AS1
LocusID (NCBI) 100507398
Atlas_Id 64630
Location 13q14.3  [Link to chromosome band 13q14]
Location_base_pair Starts at 51453345 and ends at 51454715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INTS6-AS1   42691
Cards
Entrez_Gene (NCBI)INTS6-AS1  100507398  INTS6 antisense RNA 1
Aliases
GeneCards (Weizmann)INTS6-AS1
Ensembl hg19 (Hinxton)ENSG00000236778 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236778 [Gene_View]  chr13:51453345-51454715 [Contig_View]  INTS6-AS1 [Vega]
ICGC DataPortalENSG00000236778
TCGA cBioPortalINTS6-AS1
AceView (NCBI)INTS6-AS1
Genatlas (Paris)INTS6-AS1
WikiGenes100507398
SOURCE (Princeton)INTS6-AS1
Genetics Home Reference (NIH)INTS6-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)INTS6-AS1  -     chr13:51453345-51454715 +  13q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)INTS6-AS1  -     13q14.3   [Description]    (hg19-Feb_2009)
EnsemblINTS6-AS1 - 13q14.3 [CytoView hg19]  INTS6-AS1 - 13q14.3 [CytoView hg38]
Mapping of homologs : NCBIINTS6-AS1 [Mapview hg19]  INTS6-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030118 BC045725
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)INTS6-AS1
Cluster EST : UnigeneHs.594897 [ NCBI ]
CGAP (NCI)Hs.594897
Alternative Splicing GalleryENSG00000236778
Gene ExpressionINTS6-AS1 [ NCBI-GEO ]   INTS6-AS1 [ EBI - ARRAY_EXPRESS ]   INTS6-AS1 [ SEEK ]   INTS6-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)INTS6-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507398
GTEX Portal (Tissue expression)INTS6-AS1
Human Protein AtlasENSG00000236778-INTS6-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)INTS6-AS1
DMDM Disease mutations100507398
Blocks (Seattle)INTS6-AS1
Human Protein Atlas [tissue]ENSG00000236778-INTS6-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000236778
BioGRIDINTS6-AS1
STRING (EMBL)INTS6-AS1
ZODIACINTS6-AS1
Ontologies - Pathways
Huge Navigator INTS6-AS1 [HugePedia]
snp3D : Map Gene to Disease100507398
BioCentury BCIQINTS6-AS1
ClinGenINTS6-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507398
Clinical trialINTS6-AS1
Miscellaneous
canSAR (ICR)INTS6-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINTS6-AS1
EVEXINTS6-AS1
GoPubMedINTS6-AS1
iHOPINTS6-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:04 CET 2017

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