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INTS6L (integrator complex subunit 6 like)

Identity

Alias_namesDDX26B
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
Alias_symbol (synonym)FLJ41215
Other alias
HGNC (Hugo) INTS6L
LocusID (NCBI) 203522
Atlas_Id 77839
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 135520630 and ends at 135582535 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
UBE2L6 (11q12.1) / INTS6L (Xq26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)INTS6L   27334
Cards
Entrez_Gene (NCBI)INTS6L  203522  integrator complex subunit 6 like
AliasesDDX26B
GeneCards (Weizmann)INTS6L
Ensembl hg19 (Hinxton)ENSG00000165359 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165359 [Gene_View]  chrX:135520630-135582535 [Contig_View]  INTS6L [Vega]
ICGC DataPortalENSG00000165359
TCGA cBioPortalINTS6L
AceView (NCBI)INTS6L
Genatlas (Paris)INTS6L
WikiGenes203522
SOURCE (Princeton)INTS6L
Genetics Home Reference (NIH)INTS6L
Genomic and cartography
GoldenPath hg38 (UCSC)INTS6L  -     chrX:135520630-135582535 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)INTS6L  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblINTS6L - Xq26.3 [CytoView hg19]  INTS6L - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBIINTS6L [Mapview hg19]  INTS6L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI187071 AK096544 AK123209 AK126202 AK308423
RefSeq transcript (Entrez)NM_182540
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)INTS6L
Cluster EST : UnigeneHs.496829 [ NCBI ]
CGAP (NCI)Hs.496829
Alternative Splicing GalleryENSG00000165359
Gene ExpressionINTS6L [ NCBI-GEO ]   INTS6L [ EBI - ARRAY_EXPRESS ]   INTS6L [ SEEK ]   INTS6L [ MEM ]
Gene Expression Viewer (FireBrowse)INTS6L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)203522
GTEX Portal (Tissue expression)INTS6L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JSJ4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JSJ4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JSJ4
Splice isoforms : SwissVarQ5JSJ4
PhosPhoSitePlusQ5JSJ4
Domaine pattern : Prosite (Expaxy)VWFA (PS50234)   
Domains : Interpro (EBI)INT_SG_DDX_CT_C    VWF_A   
Domain families : Pfam (Sanger)INT_SG_DDX_CT_C (PF15300)    VWA_2 (PF13519)   
Domain families : Pfam (NCBI)pfam15300    pfam13519   
Conserved Domain (NCBI)INTS6L
DMDM Disease mutations203522
Blocks (Seattle)INTS6L
SuperfamilyQ5JSJ4
Human Protein AtlasENSG00000165359
Peptide AtlasQ5JSJ4
HPRD06618
IPIIPI00456694   IPI00455129   
Protein Interaction databases
DIP (DOE-UCLA)Q5JSJ4
IntAct (EBI)Q5JSJ4
FunCoupENSG00000165359
BioGRIDINTS6L
STRING (EMBL)INTS6L
ZODIACINTS6L
Ontologies - Pathways
QuickGOQ5JSJ4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkINTS6L
Atlas of Cancer Signalling NetworkINTS6L
Wikipedia pathwaysINTS6L
Orthology - Evolution
OrthoDB203522
GeneTree (enSembl)ENSG00000165359
Phylogenetic Trees/Animal Genes : TreeFamINTS6L
HOVERGENQ5JSJ4
HOGENOMQ5JSJ4
Homologs : HomoloGeneINTS6L
Homology/Alignments : Family Browser (UCSC)INTS6L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerINTS6L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)INTS6L
dbVarINTS6L
ClinVarINTS6L
1000_GenomesINTS6L 
Exome Variant ServerINTS6L
ExAC (Exome Aggregation Consortium)INTS6L (select the gene name)
Genetic variants : HAPMAP203522
Genomic Variants (DGV)INTS6L [DGVbeta]
DECIPHERINTS6L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisINTS6L 
Mutations
ICGC Data PortalINTS6L 
TCGA Data PortalINTS6L 
Broad Tumor PortalINTS6L
OASIS PortalINTS6L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDINTS6L
BioMutasearch INTS6L
DgiDB (Drug Gene Interaction Database)INTS6L
DoCM (Curated mutations)INTS6L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)INTS6L (select a term)
intoGenINTS6L
Cancer3DINTS6L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenINTS6L
Genetic Testing Registry INTS6L
NextProtQ5JSJ4 [Medical]
TSGene203522
GENETestsINTS6L
Target ValidationINTS6L
Huge Navigator INTS6L [HugePedia]
snp3D : Map Gene to Disease203522
BioCentury BCIQINTS6L
ClinGenINTS6L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD203522
Chemical/Pharm GKB GenePA134921149
Clinical trialINTS6L
Miscellaneous
canSAR (ICR)INTS6L (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineINTS6L
EVEXINTS6L
GoPubMedINTS6L
iHOPINTS6L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 1 16:17:51 CEST 2017

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