Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IP6K3 (inositol hexakisphosphate kinase 3)

Identity

Alias_namesIHPK3
inositol hexaphosphate kinase 3
Alias_symbol (synonym)INSP6K3
Other alias
HGNC (Hugo) IP6K3
LocusID (NCBI) 117283
Atlas_Id 40937
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 33721666 and ends at 33746985 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IP6K3   17269
Cards
Entrez_Gene (NCBI)IP6K3  117283  inositol hexakisphosphate kinase 3
AliasesIHPK3; INSP6K3
GeneCards (Weizmann)IP6K3
Ensembl hg19 (Hinxton)ENSG00000161896 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000161896 [Gene_View]  ENSG00000161896 [Sequence]  chr6:33721666-33746985 [Contig_View]  IP6K3 [Vega]
ICGC DataPortalENSG00000161896
TCGA cBioPortalIP6K3
AceView (NCBI)IP6K3
Genatlas (Paris)IP6K3
WikiGenes117283
SOURCE (Princeton)IP6K3
Genetics Home Reference (NIH)IP6K3
Genomic and cartography
GoldenPath hg38 (UCSC)IP6K3  -     chr6:33721666-33746985 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IP6K3  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblIP6K3 - 6p21.31 [CytoView hg19]  IP6K3 - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBIIP6K3 [Mapview hg19]  IP6K3 [Mapview hg38]
OMIM606993   
Gene and transcription
Genbank (Entrez)AF393812 AK056586 AK223572 AK289935 BC089389
RefSeq transcript (Entrez)NM_001142883 NM_054111
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IP6K3
Cluster EST : UnigeneHs.17253 [ NCBI ]
CGAP (NCI)Hs.17253
Alternative Splicing GalleryENSG00000161896
Gene ExpressionIP6K3 [ NCBI-GEO ]   IP6K3 [ EBI - ARRAY_EXPRESS ]   IP6K3 [ SEEK ]   IP6K3 [ MEM ]
Gene Expression Viewer (FireBrowse)IP6K3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117283
GTEX Portal (Tissue expression)IP6K3
Human Protein AtlasENSG00000161896-IP6K3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PC2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PC2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PC2
Splice isoforms : SwissVarQ96PC2
Catalytic activity : Enzyme2.7.4.21 [ Enzyme-Expasy ]   2.7.4.212.7.4.21 [ IntEnz-EBI ]   2.7.4.21 [ BRENDA ]   2.7.4.21 [ KEGG ]   
PhosPhoSitePlusQ96PC2
Domains : Interpro (EBI)IPK    IPK_sf   
Domain families : Pfam (Sanger)IPK (PF03770)   
Domain families : Pfam (NCBI)pfam03770   
Conserved Domain (NCBI)IP6K3
DMDM Disease mutations117283
Blocks (Seattle)IP6K3
SuperfamilyQ96PC2
Human Protein Atlas [tissue]ENSG00000161896-IP6K3 [tissue]
Peptide AtlasQ96PC2
HPRD07381
IPIIPI00289690   
Protein Interaction databases
DIP (DOE-UCLA)Q96PC2
IntAct (EBI)Q96PC2
FunCoupENSG00000161896
BioGRIDIP6K3
STRING (EMBL)IP6K3
ZODIACIP6K3
Ontologies - Pathways
QuickGOQ96PC2
Ontology : AmiGOinositol-1,3,4,5,6-pentakisphosphate kinase activity  inositol hexakisphosphate kinase activity  inositol hexakisphosphate kinase activity  inositol heptakisphosphate kinase activity  inositol hexakisphosphate 6-kinase activity  inositol hexakisphosphate 5-kinase activity  ATP binding  nucleus  cytoplasm  cytosol  protein phosphorylation  inositol phosphate biosynthetic process  inositol phosphate metabolic process  phosphatidylinositol metabolic process  inositol hexakisphosphate 1-kinase activity  inositol hexakisphosphate 3-kinase activity  inositol 5-diphosphate pentakisphosphate 5-kinase activity  inositol diphosphate tetrakisphosphate kinase activity  
Ontology : EGO-EBIinositol-1,3,4,5,6-pentakisphosphate kinase activity  inositol hexakisphosphate kinase activity  inositol hexakisphosphate kinase activity  inositol heptakisphosphate kinase activity  inositol hexakisphosphate 6-kinase activity  inositol hexakisphosphate 5-kinase activity  ATP binding  nucleus  cytoplasm  cytosol  protein phosphorylation  inositol phosphate biosynthetic process  inositol phosphate metabolic process  phosphatidylinositol metabolic process  inositol hexakisphosphate 1-kinase activity  inositol hexakisphosphate 3-kinase activity  inositol 5-diphosphate pentakisphosphate 5-kinase activity  inositol diphosphate tetrakisphosphate kinase activity  
NDEx NetworkIP6K3
Atlas of Cancer Signalling NetworkIP6K3
Wikipedia pathwaysIP6K3
Orthology - Evolution
OrthoDB117283
GeneTree (enSembl)ENSG00000161896
Phylogenetic Trees/Animal Genes : TreeFamIP6K3
HOVERGENQ96PC2
HOGENOMQ96PC2
Homologs : HomoloGeneIP6K3
Homology/Alignments : Family Browser (UCSC)IP6K3
Gene fusions - Rearrangements
Fusion : QuiverIP6K3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIP6K3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IP6K3
dbVarIP6K3
ClinVarIP6K3
1000_GenomesIP6K3 
Exome Variant ServerIP6K3
ExAC (Exome Aggregation Consortium)ENSG00000161896
GNOMAD BrowserENSG00000161896
Varsome BrowserIP6K3
Genetic variants : HAPMAP117283
Genomic Variants (DGV)IP6K3 [DGVbeta]
DECIPHERIP6K3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIP6K3 
Mutations
ICGC Data PortalIP6K3 
TCGA Data PortalIP6K3 
Broad Tumor PortalIP6K3
OASIS PortalIP6K3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIP6K3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IP6K3
DgiDB (Drug Gene Interaction Database)IP6K3
DoCM (Curated mutations)IP6K3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IP6K3 (select a term)
intoGenIP6K3
Cancer3DIP6K3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606993   
Orphanet
DisGeNETIP6K3
MedgenIP6K3
Genetic Testing Registry IP6K3
NextProtQ96PC2 [Medical]
TSGene117283
GENETestsIP6K3
Target ValidationIP6K3
Huge Navigator IP6K3 [HugePedia]
snp3D : Map Gene to Disease117283
BioCentury BCIQIP6K3
ClinGenIP6K3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD117283
Chemical/Pharm GKB GenePA164721016
Clinical trialIP6K3
Miscellaneous
canSAR (ICR)IP6K3 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIP6K3
EVEXIP6K3
GoPubMedIP6K3
iHOPIP6K3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:13:43 CET 2018

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