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IPMK (inositol polyphosphate multikinase)

Identity

Other alias-
HGNC (Hugo) IPMK
LocusID (NCBI) 253430
Atlas_Id 56057
Location 10q21.1  [Link to chromosome band 10q21]
Location_base_pair Starts at 58191517 and ends at 58267934 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IPMK (10q21.1) / CXCL12 (10q11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IPMK   20739
Cards
Entrez_Gene (NCBI)IPMK  253430  inositol polyphosphate multikinase
Aliases
GeneCards (Weizmann)IPMK
Ensembl hg19 (Hinxton)ENSG00000151151 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151151 [Gene_View]  chr10:58191517-58267934 [Contig_View]  IPMK [Vega]
ICGC DataPortalENSG00000151151
TCGA cBioPortalIPMK
AceView (NCBI)IPMK
Genatlas (Paris)IPMK
WikiGenes253430
SOURCE (Princeton)IPMK
Genetics Home Reference (NIH)IPMK
Genomic and cartography
GoldenPath hg38 (UCSC)IPMK  -     chr10:58191517-58267934 -  10q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IPMK  -     10q21.1   [Description]    (hg19-Feb_2009)
EnsemblIPMK - 10q21.1 [CytoView hg19]  IPMK - 10q21.1 [CytoView hg38]
Mapping of homologs : NCBIIPMK [Mapview hg19]  IPMK [Mapview hg38]
OMIM609851   
Gene and transcription
Genbank (Entrez)AF432853 AK096839 BC016612 BC065709 BK000580
RefSeq transcript (Entrez)NM_152230
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IPMK
Cluster EST : UnigeneHs.30280 [ NCBI ]
CGAP (NCI)Hs.30280
Alternative Splicing GalleryENSG00000151151
Gene ExpressionIPMK [ NCBI-GEO ]   IPMK [ EBI - ARRAY_EXPRESS ]   IPMK [ SEEK ]   IPMK [ MEM ]
Gene Expression Viewer (FireBrowse)IPMK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)253430
GTEX Portal (Tissue expression)IPMK
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NFU5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NFU5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NFU5
Splice isoforms : SwissVarQ8NFU5
Catalytic activity : Enzyme2.7.1.151 [ Enzyme-Expasy ]   2.7.1.1512.7.1.151 [ IntEnz-EBI ]   2.7.1.151 [ BRENDA ]   2.7.1.151 [ KEGG ]   
PhosPhoSitePlusQ8NFU5
Domains : Interpro (EBI)IPK   
Domain families : Pfam (Sanger)IPK (PF03770)   
Domain families : Pfam (NCBI)pfam03770   
Conserved Domain (NCBI)IPMK
DMDM Disease mutations253430
Blocks (Seattle)IPMK
SuperfamilyQ8NFU5
Human Protein AtlasENSG00000151151
Peptide AtlasQ8NFU5
HPRD17153
IPIIPI00168907   
Protein Interaction databases
DIP (DOE-UCLA)Q8NFU5
IntAct (EBI)Q8NFU5
FunCoupENSG00000151151
BioGRIDIPMK
STRING (EMBL)IPMK
ZODIACIPMK
Ontologies - Pathways
QuickGOQ8NFU5
Ontology : AmiGOinositol-1,4,5-trisphosphate 6-kinase activity  inositol tetrakisphosphate 3-kinase activity  inositol tetrakisphosphate 6-kinase activity  neural tube formation  ATP binding  nucleus  nucleoplasm  nucleoplasm  nucleolus  inositol-1,4,5-trisphosphate 3-kinase activity  phosphorylation  inositol phosphate biosynthetic process  inositol phosphate metabolic process  inositol tetrakisphosphate 5-kinase activity  
Ontology : EGO-EBIinositol-1,4,5-trisphosphate 6-kinase activity  inositol tetrakisphosphate 3-kinase activity  inositol tetrakisphosphate 6-kinase activity  neural tube formation  ATP binding  nucleus  nucleoplasm  nucleoplasm  nucleolus  inositol-1,4,5-trisphosphate 3-kinase activity  phosphorylation  inositol phosphate biosynthetic process  inositol phosphate metabolic process  inositol tetrakisphosphate 5-kinase activity  
Pathways : KEGGInositol phosphate metabolism   
NDEx NetworkIPMK
Atlas of Cancer Signalling NetworkIPMK
Wikipedia pathwaysIPMK
Orthology - Evolution
OrthoDB253430
GeneTree (enSembl)ENSG00000151151
Phylogenetic Trees/Animal Genes : TreeFamIPMK
HOVERGENQ8NFU5
HOGENOMQ8NFU5
Homologs : HomoloGeneIPMK
Homology/Alignments : Family Browser (UCSC)IPMK
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIPMK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IPMK
dbVarIPMK
ClinVarIPMK
1000_GenomesIPMK 
Exome Variant ServerIPMK
ExAC (Exome Aggregation Consortium)IPMK (select the gene name)
Genetic variants : HAPMAP253430
Genomic Variants (DGV)IPMK [DGVbeta]
DECIPHERIPMK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIPMK 
Mutations
ICGC Data PortalIPMK 
TCGA Data PortalIPMK 
Broad Tumor PortalIPMK
OASIS PortalIPMK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIPMK  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIPMK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IPMK
DgiDB (Drug Gene Interaction Database)IPMK
DoCM (Curated mutations)IPMK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IPMK (select a term)
intoGenIPMK
Cancer3DIPMK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609851   
Orphanet23679   
MedgenIPMK
Genetic Testing Registry IPMK
NextProtQ8NFU5 [Medical]
TSGene253430
GENETestsIPMK
Target ValidationIPMK
Huge Navigator IPMK [HugePedia]
snp3D : Map Gene to Disease253430
BioCentury BCIQIPMK
ClinGenIPMK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD253430
Chemical/Pharm GKB GenePA134903369
Clinical trialIPMK
Miscellaneous
canSAR (ICR)IPMK (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIPMK
EVEXIPMK
GoPubMedIPMK
iHOPIPMK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:38:42 CEST 2017

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