Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IPO9-AS1 (IPO9 antisense RNA 1)

Identity

Alias_namesIPO9 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) IPO9-AS1
LocusID (NCBI) 100873949
Atlas_Id 64640
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 201688256 and ends at 201829559 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IPO9-AS1   40892
Cards
Entrez_Gene (NCBI)IPO9-AS1  100873949  IPO9 antisense RNA 1
Aliases
GeneCards (Weizmann)IPO9-AS1
Ensembl hg19 (Hinxton)ENSG00000231871 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231871 [Gene_View]  chr1:201688256-201829559 [Contig_View]  IPO9-AS1 [Vega]
ICGC DataPortalENSG00000231871
TCGA cBioPortalIPO9-AS1
AceView (NCBI)IPO9-AS1
Genatlas (Paris)IPO9-AS1
WikiGenes100873949
SOURCE (Princeton)IPO9-AS1
Genetics Home Reference (NIH)IPO9-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)IPO9-AS1  -     chr1:201688256-201829559 -  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IPO9-AS1  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblIPO9-AS1 - 1q32.1 [CytoView hg19]  IPO9-AS1 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIIPO9-AS1 [Mapview hg19]  IPO9-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI990057
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IPO9-AS1
Cluster EST : UnigeneHs.604842 [ NCBI ]
CGAP (NCI)Hs.604842
Alternative Splicing GalleryENSG00000231871
Gene ExpressionIPO9-AS1 [ NCBI-GEO ]   IPO9-AS1 [ EBI - ARRAY_EXPRESS ]   IPO9-AS1 [ SEEK ]   IPO9-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)IPO9-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873949
GTEX Portal (Tissue expression)IPO9-AS1
Human Protein AtlasENSG00000231871-IPO9-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IPO9-AS1
DMDM Disease mutations100873949
Blocks (Seattle)IPO9-AS1
Human Protein Atlas [tissue]ENSG00000231871-IPO9-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000231871
BioGRIDIPO9-AS1
STRING (EMBL)IPO9-AS1
ZODIACIPO9-AS1
Ontologies - Pathways
Huge Navigator IPO9-AS1 [HugePedia]
snp3D : Map Gene to Disease100873949
BioCentury BCIQIPO9-AS1
ClinGenIPO9-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873949
Clinical trialIPO9-AS1
Miscellaneous
canSAR (ICR)IPO9-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineIPO9-AS1
EVEXIPO9-AS1
GoPubMedIPO9-AS1
iHOPIPO9-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:51:39 CET 2017

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