Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

IPPK (inositol-pentakisphosphate 2-kinase)

Identity

Alias_namesC9orf12
chromosome 9 open reading frame 12
inositol 1,3,4,5,6-pentakisphosphate 2-kinase
Alias_symbol (synonym)INSP5K2
FLJ13163
IP5K
IPK1
Other aliasbA476B13.1
HGNC (Hugo) IPPK
LocusID (NCBI) 64768
Atlas_Id 64642
Location 9q22.31  [Link to chromosome band 9q22]
Location_base_pair Starts at 92613184 and ends at 92670265 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CORO2A (9q22.33) / IPPK (9q22.31)ERCC6L2 (9q22.32) / IPPK (9q22.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IPPK   14645
Cards
Entrez_Gene (NCBI)IPPK  64768  inositol-pentakisphosphate 2-kinase
AliasesC9orf12; INSP5K2; IP5K; IPK1; 
bA476B13.1
GeneCards (Weizmann)IPPK
Ensembl hg19 (Hinxton)ENSG00000127080 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127080 [Gene_View]  chr9:92613184-92670265 [Contig_View]  IPPK [Vega]
ICGC DataPortalENSG00000127080
TCGA cBioPortalIPPK
AceView (NCBI)IPPK
Genatlas (Paris)IPPK
WikiGenes64768
SOURCE (Princeton)IPPK
Genetics Home Reference (NIH)IPPK
Genomic and cartography
GoldenPath hg38 (UCSC)IPPK  -     chr9:92613184-92670265 -  9q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IPPK  -     9q22.31   [Description]    (hg19-Feb_2009)
EnsemblIPPK - 9q22.31 [CytoView hg19]  IPPK - 9q22.31 [CytoView hg38]
Mapping of homologs : NCBIIPPK [Mapview hg19]  IPPK [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF351200 AF351201 AF351202 AF520811 AK023225
RefSeq transcript (Entrez)NM_022755
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IPPK
Cluster EST : UnigeneHs.713775 [ NCBI ]
CGAP (NCI)Hs.713775
Alternative Splicing GalleryENSG00000127080
Gene ExpressionIPPK [ NCBI-GEO ]   IPPK [ EBI - ARRAY_EXPRESS ]   IPPK [ SEEK ]   IPPK [ MEM ]
Gene Expression Viewer (FireBrowse)IPPK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64768
GTEX Portal (Tissue expression)IPPK
Human Protein AtlasENSG00000127080-IPPK [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8X2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8X2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8X2
Splice isoforms : SwissVarQ9H8X2
Catalytic activity : Enzyme2.7.1.158 [ Enzyme-Expasy ]   2.7.1.1582.7.1.158 [ IntEnz-EBI ]   2.7.1.158 [ BRENDA ]   2.7.1.158 [ KEGG ]   
PhosPhoSitePlusQ9H8X2
Domains : Interpro (EBI)Ins_P5_2-kin   
Domain families : Pfam (Sanger)Ins_P5_2-kin (PF06090)   
Domain families : Pfam (NCBI)pfam06090   
Conserved Domain (NCBI)IPPK
DMDM Disease mutations64768
Blocks (Seattle)IPPK
SuperfamilyQ9H8X2
Human Protein Atlas [tissue]ENSG00000127080-IPPK [tissue]
Peptide AtlasQ9H8X2
HPRD10799
IPIIPI00009371   IPI00645152   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8X2
IntAct (EBI)Q9H8X2
FunCoupENSG00000127080
BioGRIDIPPK
STRING (EMBL)IPPK
ZODIACIPPK
Ontologies - Pathways
QuickGOQ9H8X2
Ontology : AmiGOATP binding  intracellular  nucleoplasm  cytosol  inositol pentakisphosphate 2-kinase activity  inositol pentakisphosphate 2-kinase activity  inositol phosphate metabolic process  inositol phosphorylation  
Ontology : EGO-EBIATP binding  intracellular  nucleoplasm  cytosol  inositol pentakisphosphate 2-kinase activity  inositol pentakisphosphate 2-kinase activity  inositol phosphate metabolic process  inositol phosphorylation  
Pathways : KEGGInositol phosphate metabolism    Phosphatidylinositol signaling system   
NDEx NetworkIPPK
Atlas of Cancer Signalling NetworkIPPK
Wikipedia pathwaysIPPK
Orthology - Evolution
OrthoDB64768
GeneTree (enSembl)ENSG00000127080
Phylogenetic Trees/Animal Genes : TreeFamIPPK
HOVERGENQ9H8X2
HOGENOMQ9H8X2
Homologs : HomoloGeneIPPK
Homology/Alignments : Family Browser (UCSC)IPPK
Gene fusions - Rearrangements
Fusion: Tumor Portal IPPK
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIPPK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IPPK
dbVarIPPK
ClinVarIPPK
1000_GenomesIPPK 
Exome Variant ServerIPPK
ExAC (Exome Aggregation Consortium)ENSG00000127080
GNOMAD BrowserENSG00000127080
Genetic variants : HAPMAP64768
Genomic Variants (DGV)IPPK [DGVbeta]
DECIPHERIPPK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIPPK 
Mutations
ICGC Data PortalIPPK 
TCGA Data PortalIPPK 
Broad Tumor PortalIPPK
OASIS PortalIPPK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIPPK  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIPPK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IPPK
DgiDB (Drug Gene Interaction Database)IPPK
DoCM (Curated mutations)IPPK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IPPK (select a term)
intoGenIPPK
Cancer3DIPPK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIPPK
Genetic Testing Registry IPPK
NextProtQ9H8X2 [Medical]
TSGene64768
GENETestsIPPK
Target ValidationIPPK
Huge Navigator IPPK [HugePedia]
snp3D : Map Gene to Disease64768
BioCentury BCIQIPPK
ClinGenIPPK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64768
Chemical/Pharm GKB GenePA25970
Clinical trialIPPK
Miscellaneous
canSAR (ICR)IPPK (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIPPK
EVEXIPPK
GoPubMedIPPK
iHOPIPPK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:51:39 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.