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IQCA1L (IQ motif containing with AAA domain 1 like)

Identity

Alias_namesIQCA1P1
IQ motif containing with AAA domain 1 pseudogene 1
Alias_symbol (synonym)TCAG_9762
Other alias
HGNC (Hugo) IQCA1L
LocusID (NCBI) 392843
Atlas_Id 77356
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 151190874 and ends at 151205496 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCA1L   22831
Cards
Entrez_Gene (NCBI)IQCA1L  392843  IQ motif containing with AAA domain 1 like
AliasesIQCA1P1
GeneCards (Weizmann)IQCA1L
Ensembl hg19 (Hinxton)ENSG00000278685 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278685 [Gene_View]  chr7:151190874-151205496 [Contig_View]  IQCA1L [Vega]
ICGC DataPortalENSG00000278685
TCGA cBioPortalIQCA1L
AceView (NCBI)IQCA1L
Genatlas (Paris)IQCA1L
WikiGenes392843
SOURCE (Princeton)IQCA1L
Genetics Home Reference (NIH)IQCA1L
Genomic and cartography
GoldenPath hg38 (UCSC)IQCA1L  -     chr7:151190874-151205496 -  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCA1L  -     7q36.1   [Description]    (hg19-Feb_2009)
EnsemblIQCA1L - 7q36.1 [CytoView hg19]  IQCA1L - 7q36.1 [CytoView hg38]
Mapping of homologs : NCBIIQCA1L [Mapview hg19]  IQCA1L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL045644 AW444952 DN831123 DV080513 DY654655
RefSeq transcript (Entrez)NM_001304419
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IQCA1L
Cluster EST : UnigeneHs.649589 [ NCBI ]
CGAP (NCI)Hs.649589
Alternative Splicing GalleryENSG00000278685
Gene ExpressionIQCA1L [ NCBI-GEO ]   IQCA1L [ EBI - ARRAY_EXPRESS ]   IQCA1L [ SEEK ]   IQCA1L [ MEM ]
Gene Expression Viewer (FireBrowse)IQCA1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392843
GTEX Portal (Tissue expression)IQCA1L
Human Protein AtlasENSG00000278685-IQCA1L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NCM1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NCM1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NCM1
Splice isoforms : SwissVarA6NCM1
PhosPhoSitePlusA6NCM1
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (EBI)ATPase_AAA_core    IQ_motif_EF-hand-BS    P-loop_NTPase   
Domain families : Pfam (Sanger)AAA (PF00004)    IQ (PF00612)   
Domain families : Pfam (NCBI)pfam00004    pfam00612   
Domain families : Smart (EMBL)IQ (SM00015)  
Conserved Domain (NCBI)IQCA1L
DMDM Disease mutations392843
Blocks (Seattle)IQCA1L
SuperfamilyA6NCM1
Human Protein Atlas [tissue]ENSG00000278685-IQCA1L [tissue]
Peptide AtlasA6NCM1
IPIIPI00248639   
Protein Interaction databases
DIP (DOE-UCLA)A6NCM1
IntAct (EBI)A6NCM1
FunCoupENSG00000278685
BioGRIDIQCA1L
STRING (EMBL)IQCA1L
ZODIACIQCA1L
Ontologies - Pathways
QuickGOA6NCM1
Ontology : AmiGOATP binding  
Ontology : EGO-EBIATP binding  
NDEx NetworkIQCA1L
Atlas of Cancer Signalling NetworkIQCA1L
Wikipedia pathwaysIQCA1L
Orthology - Evolution
OrthoDB392843
GeneTree (enSembl)ENSG00000278685
Phylogenetic Trees/Animal Genes : TreeFamIQCA1L
HOVERGENA6NCM1
HOGENOMA6NCM1
Homologs : HomoloGeneIQCA1L
Homology/Alignments : Family Browser (UCSC)IQCA1L
Gene fusions - Rearrangements
Fusion: Tumor Portal IQCA1L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIQCA1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IQCA1L
dbVarIQCA1L
ClinVarIQCA1L
1000_GenomesIQCA1L 
Exome Variant ServerIQCA1L
ExAC (Exome Aggregation Consortium)ENSG00000278685
GNOMAD BrowserENSG00000278685
Genetic variants : HAPMAP392843
Genomic Variants (DGV)IQCA1L [DGVbeta]
DECIPHERIQCA1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIQCA1L 
Mutations
ICGC Data PortalIQCA1L 
TCGA Data PortalIQCA1L 
Broad Tumor PortalIQCA1L
OASIS PortalIQCA1L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDIQCA1L
BioMutasearch IQCA1L
DgiDB (Drug Gene Interaction Database)IQCA1L
DoCM (Curated mutations)IQCA1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IQCA1L (select a term)
intoGenIQCA1L
Cancer3DIQCA1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIQCA1L
Genetic Testing Registry IQCA1L
NextProtA6NCM1 [Medical]
TSGene392843
GENETestsIQCA1L
Target ValidationIQCA1L
Huge Navigator IQCA1L [HugePedia]
snp3D : Map Gene to Disease392843
BioCentury BCIQIQCA1L
ClinGenIQCA1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD392843
Clinical trialIQCA1L
Miscellaneous
canSAR (ICR)IQCA1L (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCA1L
EVEXIQCA1L
GoPubMedIQCA1L
iHOPIQCA1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:51:40 CET 2017

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