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IQCD (IQ motif containing D)

Identity

Alias_symbol (synonym)DRC10
CFAP84
Other alias4933433C09Rik
HGNC (Hugo) IQCD
LocusID (NCBI) 115811
Atlas_Id 64646
Location 12q24.13  [Link to chromosome band 12q24]
Location_base_pair Starts at 113195441 and ends at 113221094 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DDX54 (12q24.13) / IQCD (12q24.13)IQCD (12q24.13) / CASC3 (17q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCD   25168
Cards
Entrez_Gene (NCBI)IQCD  115811  IQ motif containing D
Aliases4933433C09Rik; CFAP84; DRC10
GeneCards (Weizmann)IQCD
Ensembl hg19 (Hinxton)ENSG00000166578 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166578 [Gene_View]  chr12:113195441-113221094 [Contig_View]  IQCD [Vega]
ICGC DataPortalENSG00000166578
TCGA cBioPortalIQCD
AceView (NCBI)IQCD
Genatlas (Paris)IQCD
WikiGenes115811
SOURCE (Princeton)IQCD
Genetics Home Reference (NIH)IQCD
Genomic and cartography
GoldenPath hg38 (UCSC)IQCD  -     chr12:113195441-113221094 -  12q24.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCD  -     12q24.13   [Description]    (hg19-Feb_2009)
EnsemblIQCD - 12q24.13 [CytoView hg19]  IQCD - 12q24.13 [CytoView hg38]
Mapping of homologs : NCBIIQCD [Mapview hg19]  IQCD [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI638678 AK127152 BC013151 CD358970 DQ571611
RefSeq transcript (Entrez)NM_001330452 NM_138451
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IQCD
Cluster EST : UnigeneHs.568276 [ NCBI ]
CGAP (NCI)Hs.568276
Alternative Splicing GalleryENSG00000166578
Gene ExpressionIQCD [ NCBI-GEO ]   IQCD [ EBI - ARRAY_EXPRESS ]   IQCD [ SEEK ]   IQCD [ MEM ]
Gene Expression Viewer (FireBrowse)IQCD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)115811
GTEX Portal (Tissue expression)IQCD
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96DY2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96DY2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96DY2
Splice isoforms : SwissVarQ96DY2
PhosPhoSitePlusQ96DY2
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS   
Domain families : Pfam (Sanger)IQ (PF00612)   
Domain families : Pfam (NCBI)pfam00612   
Domain families : Smart (EMBL)IQ (SM00015)  
Conserved Domain (NCBI)IQCD
DMDM Disease mutations115811
Blocks (Seattle)IQCD
SuperfamilyQ96DY2
Human Protein AtlasENSG00000166578
Peptide AtlasQ96DY2
HPRD13744
IPIIPI00844424   IPI00794791   IPI00061273   IPI01020960   
Protein Interaction databases
DIP (DOE-UCLA)Q96DY2
IntAct (EBI)Q96DY2
FunCoupENSG00000166578
BioGRIDIQCD
STRING (EMBL)IQCD
ZODIACIQCD
Ontologies - Pathways
QuickGOQ96DY2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkIQCD
Atlas of Cancer Signalling NetworkIQCD
Wikipedia pathwaysIQCD
Orthology - Evolution
OrthoDB115811
GeneTree (enSembl)ENSG00000166578
Phylogenetic Trees/Animal Genes : TreeFamIQCD
HOVERGENQ96DY2
HOGENOMQ96DY2
Homologs : HomoloGeneIQCD
Homology/Alignments : Family Browser (UCSC)IQCD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIQCD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IQCD
dbVarIQCD
ClinVarIQCD
1000_GenomesIQCD 
Exome Variant ServerIQCD
ExAC (Exome Aggregation Consortium)IQCD (select the gene name)
Genetic variants : HAPMAP115811
Genomic Variants (DGV)IQCD [DGVbeta]
DECIPHERIQCD [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIQCD 
Mutations
ICGC Data PortalIQCD 
TCGA Data PortalIQCD 
Broad Tumor PortalIQCD
OASIS PortalIQCD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIQCD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIQCD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IQCD
DgiDB (Drug Gene Interaction Database)IQCD
DoCM (Curated mutations)IQCD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IQCD (select a term)
intoGenIQCD
Cancer3DIQCD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIQCD
Genetic Testing Registry IQCD
NextProtQ96DY2 [Medical]
TSGene115811
GENETestsIQCD
Target ValidationIQCD
Huge Navigator IQCD [HugePedia]
snp3D : Map Gene to Disease115811
BioCentury BCIQIQCD
ClinGenIQCD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115811
Chemical/Pharm GKB GenePA134901058
Clinical trialIQCD
Miscellaneous
canSAR (ICR)IQCD (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCD
EVEXIQCD
GoPubMedIQCD
iHOPIQCD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:37 CEST 2017

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