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IQCE (IQ motif containing E)

Identity

Alias (NCBI)1700028P05Rik
PAPA7
HGNC (Hugo) IQCE
HGNC Alias symbKIAA1023
LocusID (NCBI) 23288
Atlas_Id 64647
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 2558979 and ends at 2614728 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
APOC1 (19q13.32) / IQCE (7p22.3)CD9 (12p13.31) / IQCE (7p22.3)FAM114A1 (4p14) / IQCE (7p22.3)
IQCE (7p22.3) / EIF3B (7p22.3)IQCE (7p22.3) / PPM1G (2p23.3)PSME1 (14q12) / IQCE (7p22.3)
VIM (10p13) / IQCE (7p22.3)FAM114A1 IQCECD9 IQCE
VIM IQCE

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)IQCE   29171
Cards
Entrez_Gene (NCBI)IQCE    IQ motif containing E
Aliases1700028P05Rik; PAPA7
GeneCards (Weizmann)IQCE
Ensembl hg19 (Hinxton)ENSG00000106012 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106012 [Gene_View]  ENSG00000106012 [Sequence]  chr7:2558979-2614728 [Contig_View]  IQCE [Vega]
ICGC DataPortalENSG00000106012
TCGA cBioPortalIQCE
AceView (NCBI)IQCE
Genatlas (Paris)IQCE
SOURCE (Princeton)IQCE
Genetics Home Reference (NIH)IQCE
Genomic and cartography
GoldenPath hg38 (UCSC)IQCE  -     chr7:2558979-2614728 +  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCE  -     7p22.3   [Description]    (hg19-Feb_2009)
GoldenPathIQCE - 7p22.3 [CytoView hg19]  IQCE - 7p22.3 [CytoView hg38]
ImmunoBaseENSG00000106012
Genome Data Viewer NCBIIQCE [Mapview hg19]  
OMIM617631   617642   
Gene and transcription
Genbank (Entrez)AB028946 AK092404 AK293372 AK302053 AK309646
RefSeq transcript (Entrez)NM_001100390 NM_001287499 NM_001287500 NM_001287501 NM_001287502 NM_152558
Consensus coding sequences : CCDS (NCBI)IQCE
Gene ExpressionIQCE [ NCBI-GEO ]   IQCE [ EBI - ARRAY_EXPRESS ]   IQCE [ SEEK ]   IQCE [ MEM ]
Gene Expression Viewer (FireBrowse)IQCE [ Firebrowse - Broad ]
GenevisibleExpression of IQCE in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23288
GTEX Portal (Tissue expression)IQCE
Human Protein AtlasENSG00000106012-IQCE [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IPM2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IPM2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IPM2
PhosPhoSitePlusQ6IPM2
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS   
Domain families : Pfam (Sanger)IQ (PF00612)   
Domain families : Pfam (NCBI)pfam00612   
Domain families : Smart (EMBL)IQ (SM00015)  
Conserved Domain (NCBI)IQCE
SuperfamilyQ6IPM2
AlphaFold pdb e-kbQ6IPM2   
Human Protein Atlas [tissue]ENSG00000106012-IQCE [tissue]
HPRD11050
Protein Interaction databases
DIP (DOE-UCLA)Q6IPM2
IntAct (EBI)Q6IPM2
BioGRIDIQCE
STRING (EMBL)IQCE
ZODIACIQCE
Ontologies - Pathways
QuickGOQ6IPM2
Ontology : AmiGOprotein binding  cilium  limb morphogenesis  ciliary membrane  
Ontology : EGO-EBIprotein binding  cilium  limb morphogenesis  ciliary membrane  
NDEx NetworkIQCE
Atlas of Cancer Signalling NetworkIQCE
Wikipedia pathwaysIQCE
Orthology - Evolution
OrthoDB23288
GeneTree (enSembl)ENSG00000106012
Phylogenetic Trees/Animal Genes : TreeFamIQCE
Homologs : HomoloGeneIQCE
Homology/Alignments : Family Browser (UCSC)IQCE
Gene fusions - Rearrangements
Fusion : QuiverIQCE
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIQCE [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IQCE
dbVarIQCE
ClinVarIQCE
MonarchIQCE
1000_GenomesIQCE 
Exome Variant ServerIQCE
GNOMAD BrowserENSG00000106012
Varsome BrowserIQCE
ACMGIQCE variants
VarityQ6IPM2
Genomic Variants (DGV)IQCE [DGVbeta]
DECIPHERIQCE [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIQCE 
Mutations
ICGC Data PortalIQCE 
TCGA Data PortalIQCE 
Broad Tumor PortalIQCE
OASIS PortalIQCE [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIQCE  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DIQCE
Mutations and Diseases : HGMDIQCE
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaIQCE
DgiDB (Drug Gene Interaction Database)IQCE
DoCM (Curated mutations)IQCE
CIViC (Clinical Interpretations of Variants in Cancer)IQCE
Cancer3DIQCE
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617631    617642   
Orphanet
DisGeNETIQCE
MedgenIQCE
Genetic Testing Registry IQCE
NextProtQ6IPM2 [Medical]
GENETestsIQCE
Target ValidationIQCE
Huge Navigator IQCE [HugePedia]
ClinGenIQCE
Clinical trials, drugs, therapy
MyCancerGenomeIQCE
Protein Interactions : CTDIQCE
Pharm GKB GenePA134894706
PharosQ6IPM2
Clinical trialIQCE
Miscellaneous
canSAR (ICR)IQCE
HarmonizomeIQCE
DataMed IndexIQCE
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXIQCE
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:53:54 CEST 2021

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