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IQCF3 (IQ motif containing F3)

Identity

Other alias-
HGNC (Hugo) IQCF3
LocusID (NCBI) 401067
Atlas_Id 64650
Location 3p21.2  [Link to chromosome band 3p21]
Location_base_pair Starts at 51860899 and ends at 51864874 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCF3   31816
Cards
Entrez_Gene (NCBI)IQCF3  401067  IQ motif containing F3
Aliases
GeneCards (Weizmann)IQCF3
Ensembl hg19 (Hinxton)ENSG00000229972 [Gene_View]  chr3:51860899-51864874 [Contig_View]  IQCF3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000229972 [Gene_View]  chr3:51860899-51864874 [Contig_View]  IQCF3 [Vega]
ICGC DataPortalENSG00000229972
TCGA cBioPortalIQCF3
AceView (NCBI)IQCF3
Genatlas (Paris)IQCF3
WikiGenes401067
SOURCE (Princeton)IQCF3
Genetics Home Reference (NIH)IQCF3
Genomic and cartography
GoldenPath hg19 (UCSC)IQCF3  -     chr3:51860899-51864874 +  3p21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IQCF3  -     3p21.2   [Description]    (hg38-Dec_2013)
EnsemblIQCF3 - 3p21.2 [CytoView hg19]  IQCF3 - 3p21.2 [CytoView hg38]
Mapping of homologs : NCBIIQCF3 [Mapview hg19]  IQCF3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA991812 BC021188 BC146874 BC146889 BC171811
RefSeq transcript (Entrez)NM_001085479 NM_001207023
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929309
Consensus coding sequences : CCDS (NCBI)IQCF3
Cluster EST : UnigeneHs.729443 [ NCBI ]
CGAP (NCI)Hs.729443
Alternative Splicing GalleryENSG00000229972
Gene ExpressionIQCF3 [ NCBI-GEO ]   IQCF3 [ EBI - ARRAY_EXPRESS ]   IQCF3 [ SEEK ]   IQCF3 [ MEM ]
Gene Expression Viewer (FireBrowse)IQCF3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401067
GTEX Portal (Tissue expression)IQCF3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C7M6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C7M6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C7M6
Splice isoforms : SwissVarP0C7M6
PhosPhoSitePlusP0C7M6
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS   
Domain families : Pfam (Sanger)IQ (PF00612)   
Domain families : Pfam (NCBI)pfam00612   
Domain families : Smart (EMBL)IQ (SM00015)  
Conserved Domain (NCBI)IQCF3
DMDM Disease mutations401067
Blocks (Seattle)IQCF3
SuperfamilyP0C7M6
Human Protein AtlasENSG00000229972
Peptide AtlasP0C7M6
IPIIPI00795697   IPI00740441   
Protein Interaction databases
DIP (DOE-UCLA)P0C7M6
IntAct (EBI)P0C7M6
FunCoupENSG00000229972
BioGRIDIQCF3
STRING (EMBL)IQCF3
ZODIACIQCF3
Ontologies - Pathways
QuickGOP0C7M6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkIQCF3
Atlas of Cancer Signalling NetworkIQCF3
Wikipedia pathwaysIQCF3
Orthology - Evolution
OrthoDB401067
GeneTree (enSembl)ENSG00000229972
Phylogenetic Trees/Animal Genes : TreeFamIQCF3
HOVERGENP0C7M6
HOGENOMP0C7M6
Homologs : HomoloGeneIQCF3
Homology/Alignments : Family Browser (UCSC)IQCF3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIQCF3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IQCF3
dbVarIQCF3
ClinVarIQCF3
1000_GenomesIQCF3 
Exome Variant ServerIQCF3
ExAC (Exome Aggregation Consortium)IQCF3 (select the gene name)
Genetic variants : HAPMAP401067
Genomic Variants (DGV)IQCF3 [DGVbeta]
DECIPHER (Syndromes)3:51860899-51864874  ENSG00000229972
CONAN: Copy Number AnalysisIQCF3 
Mutations
ICGC Data PortalIQCF3 
TCGA Data PortalIQCF3 
Broad Tumor PortalIQCF3
OASIS PortalIQCF3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIQCF3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIQCF3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IQCF3
DgiDB (Drug Gene Interaction Database)IQCF3
DoCM (Curated mutations)IQCF3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IQCF3 (select a term)
intoGenIQCF3
Cancer3DIQCF3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIQCF3
Genetic Testing Registry IQCF3
NextProtP0C7M6 [Medical]
TSGene401067
GENETestsIQCF3
Huge Navigator IQCF3 [HugePedia]
snp3D : Map Gene to Disease401067
BioCentury BCIQIQCF3
ClinGenIQCF3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401067
Chemical/Pharm GKB GenePA134884625
Clinical trialIQCF3
Miscellaneous
canSAR (ICR)IQCF3 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCF3
EVEXIQCF3
GoPubMedIQCF3
iHOPIQCF3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:08:58 CET 2017

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