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IQCF4 (IQ motif containing F5 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100506840
Atlas_Id 64651
Location 3p21.2  [Link to chromosome band 3p21]
Location_base_pair Starts at 51817603 and ends at 51819635 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)IQCF4  100506840  IQ motif containing F5 pseudogene
Aliases
GeneCards (Weizmann)IQCF4
Ensembl hg19 (Hinxton)ENSG00000224792 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000224792 [Gene_View]  chr3:51817603-51819635 [Contig_View]  IQCF4 [Vega]
ICGC DataPortalENSG00000224792
TCGA cBioPortalIQCF4
AceView (NCBI)IQCF4
Genatlas (Paris)IQCF4
WikiGenes100506840
SOURCE (Princeton)IQCF4
Genetics Home Reference (NIH)IQCF4
Genomic and cartography
GoldenPath hg38 (UCSC)IQCF4  -     chr3:51817603-51819635 +  3p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCF4  -     3p21.2   [Description]    (hg19-Feb_2009)
EnsemblIQCF4 - 3p21.2 [CytoView hg19]  IQCF4 - 3p21.2 [CytoView hg38]
Mapping of homologs : NCBIIQCF4 [Mapview hg19]  IQCF4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA398133 AA460742 AW291394 GQ870251
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IQCF4
Cluster EST : UnigeneHs.254808 [ NCBI ]
CGAP (NCI)Hs.254808
Alternative Splicing GalleryENSG00000224792
Gene ExpressionIQCF4 [ NCBI-GEO ]   IQCF4 [ EBI - ARRAY_EXPRESS ]   IQCF4 [ SEEK ]   IQCF4 [ MEM ]
Gene Expression Viewer (FireBrowse)IQCF4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506840
GTEX Portal (Tissue expression)IQCF4
Human Protein AtlasENSG00000224792-IQCF4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IQCF4
DMDM Disease mutations100506840
Blocks (Seattle)IQCF4
Human Protein Atlas [tissue]ENSG00000224792-IQCF4 [tissue]
Protein Interaction databases
FunCoupENSG00000224792
BioGRIDIQCF4
STRING (EMBL)IQCF4
ZODIACIQCF4
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100506840
BioCentury BCIQIQCF4
ClinGenIQCF4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506840
Clinical trialIQCF4
Miscellaneous
canSAR (ICR)IQCF4 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCF4
EVEXIQCF4
GoPubMedIQCF4
iHOPIQCF4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:45:58 CET 2017

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