Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IQCF5-AS1 (IQCF5 antisense RNA 1)

Identity

Alias_namesIQCF5 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) IQCF5-AS1
LocusID (NCBI) 101928999
Atlas_Id 64653
Location 3p21.2  [Link to chromosome band 3p21]
Location_base_pair Starts at 51873596 and ends at 51875767 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCF5-AS1   41297
Cards
Entrez_Gene (NCBI)IQCF5-AS1  101928999  IQCF5 antisense RNA 1
Aliases
GeneCards (Weizmann)IQCF5-AS1
Ensembl hg19 (Hinxton)ENSG00000235455 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235455 [Gene_View]  chr3:51873596-51875767 [Contig_View]  IQCF5-AS1 [Vega]
ICGC DataPortalENSG00000235455
TCGA cBioPortalIQCF5-AS1
AceView (NCBI)IQCF5-AS1
Genatlas (Paris)IQCF5-AS1
WikiGenes101928999
SOURCE (Princeton)IQCF5-AS1
Genetics Home Reference (NIH)IQCF5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)IQCF5-AS1  -     chr3:51873596-51875767 +  3p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCF5-AS1  -     3p21.2   [Description]    (hg19-Feb_2009)
EnsemblIQCF5-AS1 - 3p21.2 [CytoView hg19]  IQCF5-AS1 - 3p21.2 [CytoView hg38]
Mapping of homologs : NCBIIQCF5-AS1 [Mapview hg19]  IQCF5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097471
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IQCF5-AS1
Alternative Splicing GalleryENSG00000235455
Gene ExpressionIQCF5-AS1 [ NCBI-GEO ]   IQCF5-AS1 [ EBI - ARRAY_EXPRESS ]   IQCF5-AS1 [ SEEK ]   IQCF5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)IQCF5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928999
GTEX Portal (Tissue expression)IQCF5-AS1
Human Protein AtlasENSG00000235455-IQCF5-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IQCF5-AS1
DMDM Disease mutations101928999
Blocks (Seattle)IQCF5-AS1
Human Protein Atlas [tissue]ENSG00000235455-IQCF5-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000235455
BioGRIDIQCF5-AS1
STRING (EMBL)IQCF5-AS1
ZODIACIQCF5-AS1
Ontologies - Pathways
Huge Navigator IQCF5-AS1 [HugePedia]
snp3D : Map Gene to Disease101928999
BioCentury BCIQIQCF5-AS1
ClinGenIQCF5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928999
Clinical trialIQCF5-AS1
Miscellaneous
canSAR (ICR)IQCF5-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCF5-AS1
EVEXIQCF5-AS1
GoPubMedIQCF5-AS1
iHOPIQCF5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:51:41 CET 2017

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