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IQCF6 (IQ motif containing F6)

Identity

Other alias-
HGNC (Hugo) IQCF6
LocusID (NCBI) 440956
Atlas_Id 64654
Location 3p21.2  [Link to chromosome band 3p21]
Location_base_pair Starts at 51778561 and ends at 51779187 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCF6   35158
Cards
Entrez_Gene (NCBI)IQCF6  440956  IQ motif containing F6
Aliases
GeneCards (Weizmann)IQCF6
Ensembl hg19 (Hinxton)ENSG00000214686 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214686 [Gene_View]  chr3:51778561-51779187 [Contig_View]  IQCF6 [Vega]
ICGC DataPortalENSG00000214686
TCGA cBioPortalIQCF6
AceView (NCBI)IQCF6
Genatlas (Paris)IQCF6
WikiGenes440956
SOURCE (Princeton)IQCF6
Genetics Home Reference (NIH)IQCF6
Genomic and cartography
GoldenPath hg38 (UCSC)IQCF6  -     chr3:51778561-51779187 -  3p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCF6  -     3p21.2   [Description]    (hg19-Feb_2009)
EnsemblIQCF6 - 3p21.2 [CytoView hg19]  IQCF6 - 3p21.2 [CytoView hg38]
Mapping of homologs : NCBIIQCF6 [Mapview hg19]  IQCF6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX093815
RefSeq transcript (Entrez)NM_001143833
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IQCF6
Cluster EST : UnigeneHs.444316 [ NCBI ]
CGAP (NCI)Hs.444316
Alternative Splicing GalleryENSG00000214686
Gene ExpressionIQCF6 [ NCBI-GEO ]   IQCF6 [ EBI - ARRAY_EXPRESS ]   IQCF6 [ SEEK ]   IQCF6 [ MEM ]
Gene Expression Viewer (FireBrowse)IQCF6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)440956
GTEX Portal (Tissue expression)IQCF6
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MYZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MYZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MYZ5
Splice isoforms : SwissVarA8MYZ5
PhosPhoSitePlusA8MYZ5
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS   
Domain families : Pfam (Sanger)IQ (PF00612)   
Domain families : Pfam (NCBI)pfam00612   
Conserved Domain (NCBI)IQCF6
DMDM Disease mutations440956
Blocks (Seattle)IQCF6
SuperfamilyA8MYZ5
Human Protein AtlasENSG00000214686
Peptide AtlasA8MYZ5
IPIIPI00455574   
Protein Interaction databases
DIP (DOE-UCLA)A8MYZ5
IntAct (EBI)A8MYZ5
FunCoupENSG00000214686
BioGRIDIQCF6
STRING (EMBL)IQCF6
ZODIACIQCF6
Ontologies - Pathways
QuickGOA8MYZ5
Ontology : AmiGOcalmodulin binding  
Ontology : EGO-EBIcalmodulin binding  
NDEx NetworkIQCF6
Atlas of Cancer Signalling NetworkIQCF6
Wikipedia pathwaysIQCF6
Orthology - Evolution
OrthoDB440956
GeneTree (enSembl)ENSG00000214686
Phylogenetic Trees/Animal Genes : TreeFamIQCF6
HOVERGENA8MYZ5
HOGENOMA8MYZ5
Homologs : HomoloGeneIQCF6
Homology/Alignments : Family Browser (UCSC)IQCF6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIQCF6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IQCF6
dbVarIQCF6
ClinVarIQCF6
1000_GenomesIQCF6 
Exome Variant ServerIQCF6
ExAC (Exome Aggregation Consortium)IQCF6 (select the gene name)
Genetic variants : HAPMAP440956
Genomic Variants (DGV)IQCF6 [DGVbeta]
DECIPHERIQCF6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisIQCF6 
Mutations
ICGC Data PortalIQCF6 
TCGA Data PortalIQCF6 
Broad Tumor PortalIQCF6
OASIS PortalIQCF6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIQCF6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIQCF6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IQCF6
DgiDB (Drug Gene Interaction Database)IQCF6
DoCM (Curated mutations)IQCF6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IQCF6 (select a term)
intoGenIQCF6
Cancer3DIQCF6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIQCF6
Genetic Testing Registry IQCF6
NextProtA8MYZ5 [Medical]
TSGene440956
GENETestsIQCF6
Target ValidationIQCF6
Huge Navigator IQCF6 [HugePedia]
snp3D : Map Gene to Disease440956
BioCentury BCIQIQCF6
ClinGenIQCF6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440956
Chemical/Pharm GKB GenePA164721071
Clinical trialIQCF6
Miscellaneous
canSAR (ICR)IQCF6 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCF6
EVEXIQCF6
GoPubMedIQCF6
iHOPIQCF6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:18 CEST 2017

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