Atlas of Genetics and Cytogenetics in Oncology and Haematology


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IQCJ-SCHIP1 (IQCJ-SCHIP1 readthrough)

Identity

Other alias-
HGNC (Hugo) IQCJ-SCHIP1
LocusID (NCBI) 100505385
Atlas_Id 64657
Location 3q25.32  [Link to chromosome band 3q25]
Location_base_pair Starts at 159069252 and ends at 159897366 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IQCJ-SCHIP1 (3q25.32) / CD55 (1q32.2)IQCJ-SCHIP1 (3q25.32) / FEZ1 (11q24.2)NCAPG2 (7q36.3) / IQCJ-SCHIP1 (3q25.32)
RIOK1 (6p24.3) / IQCJ-SCHIP1 (3q25.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCJ-SCHIP1   38842
Cards
Entrez_Gene (NCBI)IQCJ-SCHIP1  100505385  IQCJ-SCHIP1 readthrough
Aliases
GeneCards (Weizmann)IQCJ-SCHIP1
Ensembl hg19 (Hinxton)ENSG00000250588 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000250588 [Gene_View]  chr3:159069252-159897366 [Contig_View]  IQCJ-SCHIP1 [Vega]
ICGC DataPortalENSG00000250588
TCGA cBioPortalIQCJ-SCHIP1
AceView (NCBI)IQCJ-SCHIP1
Genatlas (Paris)IQCJ-SCHIP1
WikiGenes100505385
SOURCE (Princeton)IQCJ-SCHIP1
Genetics Home Reference (NIH)IQCJ-SCHIP1
Genomic and cartography
GoldenPath hg38 (UCSC)IQCJ-SCHIP1  -     chr3:159069252-159897366 +  3q25.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)IQCJ-SCHIP1  -     3q25.32   [Description]    (hg19-Feb_2009)
EnsemblIQCJ-SCHIP1 - 3q25.32 [CytoView hg19]  IQCJ-SCHIP1 - 3q25.32 [CytoView hg38]
Mapping of homologs : NCBIIQCJ-SCHIP1 [Mapview hg19]  IQCJ-SCHIP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096479 DQ157847 DQ157848
RefSeq transcript (Entrez)NM_001197113 NM_001197114
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)IQCJ-SCHIP1
Cluster EST : UnigeneHs.134665 [ NCBI ]
CGAP (NCI)Hs.134665
Alternative Splicing GalleryENSG00000250588
Gene ExpressionIQCJ-SCHIP1 [ NCBI-GEO ]   IQCJ-SCHIP1 [ EBI - ARRAY_EXPRESS ]   IQCJ-SCHIP1 [ SEEK ]   IQCJ-SCHIP1 [ MEM ]
Gene Expression Viewer (FireBrowse)IQCJ-SCHIP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505385
GTEX Portal (Tissue expression)IQCJ-SCHIP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IQCJ-SCHIP1
DMDM Disease mutations100505385
Blocks (Seattle)IQCJ-SCHIP1
Human Protein AtlasENSG00000250588
Protein Interaction databases
FunCoupENSG00000250588
BioGRIDIQCJ-SCHIP1
STRING (EMBL)IQCJ-SCHIP1
ZODIACIQCJ-SCHIP1
Ontologies - Pathways
Huge Navigator IQCJ-SCHIP1 [HugePedia]
snp3D : Map Gene to Disease100505385
BioCentury BCIQIQCJ-SCHIP1
ClinGenIQCJ-SCHIP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505385
Clinical trialIQCJ-SCHIP1
Miscellaneous
canSAR (ICR)IQCJ-SCHIP1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCJ-SCHIP1
EVEXIQCJ-SCHIP1
GoPubMedIQCJ-SCHIP1
iHOPIQCJ-SCHIP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:39 CEST 2017

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