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IQCK (IQ motif containing K)

Identity

Alias_symbol (synonym)MGC35048
FLJ36575
Other alias-
HGNC (Hugo) IQCK
LocusID (NCBI) 124152
Atlas_Id 54382
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 19727778 and ends at 19869789 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
C16orf62 (16p12.3) / IQCK (16p12.3)IQCK (16p12.3) / IQCK (16p12.3)KIAA0430 (16p13.11) / IQCK (16p12.3)
KIAA0430 16p13.11 / IQCK 16p12.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IQCK   28556
Cards
Entrez_Gene (NCBI)IQCK  124152  IQ motif containing K
Aliases
GeneCards (Weizmann)IQCK
Ensembl hg19 (Hinxton)ENSG00000174628 [Gene_View]  chr16:19727778-19869789 [Contig_View]  IQCK [Vega]
Ensembl hg38 (Hinxton)ENSG00000174628 [Gene_View]  chr16:19727778-19869789 [Contig_View]  IQCK [Vega]
ICGC DataPortalENSG00000174628
TCGA cBioPortalIQCK
AceView (NCBI)IQCK
Genatlas (Paris)IQCK
WikiGenes124152
SOURCE (Princeton)IQCK
Genetics Home Reference (NIH)IQCK
Genomic and cartography
GoldenPath hg19 (UCSC)IQCK  -     chr16:19727778-19869789 +  16p12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IQCK  -     16p12.3   [Description]    (hg38-Dec_2013)
EnsemblIQCK - 16p12.3 [CytoView hg19]  IQCK - 16p12.3 [CytoView hg38]
Mapping of homologs : NCBIIQCK [Mapview hg19]  IQCK [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF520569 AF520570 AK000122 AK093894 AK301933
RefSeq transcript (Entrez)NM_001305121 NM_001305122 NM_153208
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)IQCK
Cluster EST : UnigeneHs.656664 [ NCBI ]
CGAP (NCI)Hs.656664
Alternative Splicing GalleryENSG00000174628
Gene ExpressionIQCK [ NCBI-GEO ]   IQCK [ EBI - ARRAY_EXPRESS ]   IQCK [ SEEK ]   IQCK [ MEM ]
Gene Expression Viewer (FireBrowse)IQCK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)124152
GTEX Portal (Tissue expression)IQCK
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N0W5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N0W5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N0W5
Splice isoforms : SwissVarQ8N0W5
PhosPhoSitePlusQ8N0W5
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)IQCK
DMDM Disease mutations124152
Blocks (Seattle)IQCK
SuperfamilyQ8N0W5
Human Protein AtlasENSG00000174628
Peptide AtlasQ8N0W5
HPRD11340
IPIIPI00170918   IPI00186056   IPI00844562   IPI00908655   IPI01011499   IPI00815952   
Protein Interaction databases
DIP (DOE-UCLA)Q8N0W5
IntAct (EBI)Q8N0W5
FunCoupENSG00000174628
BioGRIDIQCK
STRING (EMBL)IQCK
ZODIACIQCK
Ontologies - Pathways
QuickGOQ8N0W5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkIQCK
Atlas of Cancer Signalling NetworkIQCK
Wikipedia pathwaysIQCK
Orthology - Evolution
OrthoDB124152
GeneTree (enSembl)ENSG00000174628
Phylogenetic Trees/Animal Genes : TreeFamIQCK
HOVERGENQ8N0W5
HOGENOMQ8N0W5
Homologs : HomoloGeneIQCK
Homology/Alignments : Family Browser (UCSC)IQCK
Gene fusions - Rearrangements
Fusion : MitelmanC16orf62/IQCK [16p12.3/16p12.3]  [t(16;16)(p12;p12)]  
Fusion : MitelmanKIAA0430/IQCK [16p13.11/16p12.3]  [t(16;16)(p12;p13)]  
Fusion: TCGAKIAA0430 16p13.11 IQCK 16p12.3 BLCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIQCK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IQCK
dbVarIQCK
ClinVarIQCK
1000_GenomesIQCK 
Exome Variant ServerIQCK
ExAC (Exome Aggregation Consortium)IQCK (select the gene name)
Genetic variants : HAPMAP124152
Genomic Variants (DGV)IQCK [DGVbeta]
DECIPHER (Syndromes)16:19727778-19869789  ENSG00000174628
CONAN: Copy Number AnalysisIQCK 
Mutations
ICGC Data PortalIQCK 
TCGA Data PortalIQCK 
Broad Tumor PortalIQCK
OASIS PortalIQCK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIQCK  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIQCK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IQCK
DgiDB (Drug Gene Interaction Database)IQCK
DoCM (Curated mutations)IQCK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IQCK (select a term)
intoGenIQCK
Cancer3DIQCK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIQCK
Genetic Testing Registry IQCK
NextProtQ8N0W5 [Medical]
TSGene124152
GENETestsIQCK
Huge Navigator IQCK [HugePedia]
snp3D : Map Gene to Disease124152
BioCentury BCIQIQCK
ClinGenIQCK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD124152
Chemical/Pharm GKB GenePA145148697
Clinical trialIQCK
Miscellaneous
canSAR (ICR)IQCK (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIQCK
EVEXIQCK
GoPubMedIQCK
iHOPIQCK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:05:25 CEST 2017

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