IQSEC1 (IQ motif and Sec7 domain 1)

Identity

Other names	ARFGEP100
	KIAA0763
HGNC	IQSEC1
Location	3p25.2
Location_base_pair	Starts at 12914374 and ends at 12983960 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	IQSEC1   29112
Entrez_Gene	IQSEC1  9922  IQ motif and Sec7 domain 1
	Cards
GeneCards	IQSEC1
Ensembl	IQSEC1 [Search_View]   ENSG00000144711 [Gene_View]
Genatlas	IQSEC1
GeneLynx	IQSEC1
eGenome	IQSEC1
euGene	9922
	Genomic and cartography
GoldenPath	IQSEC1  -  3p25.2   chr3:12914374-12983960 -  3p25.1   [Description]    (hg18-March_2006)
Ensembl	IQSEC1 - 3p25.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	IQSEC1
	Gene and transcription
Genbank	AB018306 [ ENTREZ ]
Genbank	AF055004 [ ENTREZ ]
Genbank	AK294525 [ ENTREZ ]
Genbank	AY653734 [ ENTREZ ]
Genbank	BC010267 [ ENTREZ ]
RefSeq	NM_014869 [ SRS ]    NM_014869 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
AceView	IQSEC1 AceView - NCBI
Unigene	Hs.712573 [ SRS ]    Hs.712573 [ NCBI ]     HS712573 [ spliceNest ]
Fast-db	2348 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6DN90 [ SRS]    Q6DN90 [ EXPASY ]     Q6DN90 [ INTERPRO ]     Q6DN90 [ UNIPROT ]
Prosite	PS50096 IQ [ SRS ]    PS50096 IQ [ Expasy ]
Prosite	PS50003 PH_DOMAIN [ SRS ]    PS50003 PH_DOMAIN [ Expasy ]
Prosite	PS50190 SEC7 [ SRS ]    PS50190 SEC7 [ Expasy ]
Interpro	IPR000048 IQ_CaM_bd_region [ SRS ]    IPR000048 IQ_CaM_bd_region [ EBI ]
Interpro	IPR001849 PH [ SRS ]    IPR001849 PH [ EBI ]
Interpro	IPR000904 Sec7 [ SRS ]    IPR000904 Sec7 [ EBI ]
CluSTr	Q6DN90
Pfam	PF00612 IQ [ SRS ]    PF00612 IQ [ Sanger ]    pfam00612 [ NCBI-CDD ]
Pfam	PF01369 Sec7 [ SRS ]    PF01369 Sec7 [ Sanger ]    pfam01369 [ NCBI-CDD ]
Smart	SM00233 PH [EMBL]
Smart	SM00222 Sec7 [EMBL]
Blocks	Q6DN90
HPRD	11052
	Protein Interaction databases
DIP	Q6DN90
IntAct	Q6DN90
	Polymorphism : SNP, mutations, diseases
OMIM	610166    [ map ]
GENECLINICS	610166
SNP	IQSEC1 [dbSNP-NCBI]
SNP	NM_014869 [SNP-NCI]
SNP	IQSEC1 [GeneSNPs - Utah]  IQSEC1] [HGBASE - SRS]
HAPMAP	IQSEC1 [HAPMAP]
HGMD	IQSEC1
	General knowledge
Family Browser	IQSEC1 [UCSC Family Browser]
SOURCE	NM_014869
SMD	Hs.712573
SAGE	Hs.712573
GO	ARF guanyl-nucleotide exchange factor activity [Amigo]  ARF guanyl-nucleotide exchange factor activity
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	regulation of ARF protein signal transduction [Amigo]  regulation of ARF protein signal transduction
PubGene	IQSEC1
TreeFam	IQSEC1
CTD	9922 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	IQSEC1 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:46:52 2008