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ISPD (-)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 729920
Atlas_Id 54386
Location -  [Link to chromosome band ]
Location_base_pair Starts at 16087527 and ends at 16421322 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANKMY2 (7p21.1) / ISPD (7p21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]

Solid Tumors TranslocLungSmallCellCarcID6651 TT_del07p21p21ID6702


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)ISPD  729920  -
Aliases
GeneCards (Weizmann)ISPD
Ensembl hg19 (Hinxton)ENSG00000214960 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214960 [Gene_View]  ENSG00000214960 [Sequence]  chr7:16087527-16421322 [Contig_View]  ISPD [Vega]
ICGC DataPortalENSG00000214960
TCGA cBioPortalISPD
AceView (NCBI)ISPD
Genatlas (Paris)ISPD
WikiGenes729920
SOURCE (Princeton)ISPD
Genetics Home Reference (NIH)ISPD
Genomic and cartography
GoldenPath hg38 (UCSC)ISPD  -     chr7:16087527-16421322 -  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ISPD  -     -   [Description]    (hg19-Feb_2009)
GoldenPathISPD - - [CytoView hg19]  ISPD - - [CytoView hg38]
ImmunoBaseENSG00000214960
Mapping of homologs : NCBIISPD [Mapview hg19]  ISPD [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ISPD
Alternative Splicing GalleryENSG00000214960
Gene ExpressionISPD [ NCBI-GEO ]   ISPD [ EBI - ARRAY_EXPRESS ]   ISPD [ SEEK ]   ISPD [ MEM ]
Gene Expression Viewer (FireBrowse)ISPD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729920
GTEX Portal (Tissue expression)ISPD
Human Protein AtlasENSG00000214960-ISPD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ISPD
DMDM Disease mutations729920
Blocks (Seattle)ISPD
Human Protein Atlas [tissue]ENSG00000214960-ISPD [tissue]
IPIIPI00894461   IPI00446107   IPI00893336   
Protein Interaction databases
FunCoupENSG00000214960
BioGRIDISPD
STRING (EMBL)ISPD
ZODIACISPD
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease729920
BioCentury BCIQISPD
ClinGenISPD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729920
Clinical trialISPD
Miscellaneous
canSAR (ICR)ISPD (select the gene name)
DataMed IndexISPD
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineISPD
EVEXISPD
GoPubMedISPD
iHOPISPD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Feb 3 15:04:36 CET 2020

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