Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ISY1-RAB43 (ISY1-RAB43 readthrough)

Identity

Other alias-
HGNC (Hugo) ISY1-RAB43
LocusID (NCBI) 100534599
Atlas_Id 64680
Location 3q21.3  [Link to chromosome band 3q21]
Location_base_pair Starts at 129087569 and ends at 129161230 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACTB (7p22.1) / ISY1-RAB43 (3q21.3)ISY1-RAB43 (3q21.3) / BAZ1B (7q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ISY1-RAB43   42969
Cards
Entrez_Gene (NCBI)ISY1-RAB43  100534599  ISY1-RAB43 readthrough
Aliases
GeneCards (Weizmann)ISY1-RAB43
Ensembl hg19 (Hinxton)ENSG00000240682 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000240682 [Gene_View]  chr3:129087569-129161230 [Contig_View]  ISY1-RAB43 [Vega]
ICGC DataPortalENSG00000240682
TCGA cBioPortalISY1-RAB43
AceView (NCBI)ISY1-RAB43
Genatlas (Paris)ISY1-RAB43
WikiGenes100534599
SOURCE (Princeton)ISY1-RAB43
Genetics Home Reference (NIH)ISY1-RAB43
Genomic and cartography
GoldenPath hg38 (UCSC)ISY1-RAB43  -     chr3:129087569-129161230 -  3q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ISY1-RAB43  -     3q21.3   [Description]    (hg19-Feb_2009)
EnsemblISY1-RAB43 - 3q21.3 [CytoView hg19]  ISY1-RAB43 - 3q21.3 [CytoView hg38]
Mapping of homologs : NCBIISY1-RAB43 [Mapview hg19]  ISY1-RAB43 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB032986
RefSeq transcript (Entrez)NM_001204890
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ISY1-RAB43
Cluster EST : UnigeneHs.512661 [ NCBI ]
CGAP (NCI)Hs.512661
Alternative Splicing GalleryENSG00000240682
Gene ExpressionISY1-RAB43 [ NCBI-GEO ]   ISY1-RAB43 [ EBI - ARRAY_EXPRESS ]   ISY1-RAB43 [ SEEK ]   ISY1-RAB43 [ MEM ]
Gene Expression Viewer (FireBrowse)ISY1-RAB43 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100534599
GTEX Portal (Tissue expression)ISY1-RAB43
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ISY1-RAB43
DMDM Disease mutations100534599
Blocks (Seattle)ISY1-RAB43
Human Protein AtlasENSG00000240682
IPIIPI00744858   
Protein Interaction databases
FunCoupENSG00000240682
BioGRIDISY1-RAB43
STRING (EMBL)ISY1-RAB43
ZODIACISY1-RAB43
Ontologies - Pathways
Huge Navigator ISY1-RAB43 [HugePedia]
snp3D : Map Gene to Disease100534599
BioCentury BCIQISY1-RAB43
ClinGenISY1-RAB43
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100534599
Clinical trialISY1-RAB43
Miscellaneous
canSAR (ICR)ISY1-RAB43 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineISY1-RAB43
EVEXISY1-RAB43
GoPubMedISY1-RAB43
iHOPISY1-RAB43
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:44 CEST 2017

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