ISY1 (ISY1 splicing factor homolog)

2015-10-01  

Identity

HGNC
LOCATION
3q21.3
LOCUSID
ALIAS
FSAP33
FUSION GENES

Other Information

Locus ID:

NCBI: 57461
MIM: 612764
HGNC: 29201
Ensembl: ENSG00000240682

Variants:

dbSNP: 57461
ClinVar: 57461
TCGA: ENSG00000240682
COSMIC: ISY1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000240682ENST00000273541Q9ULR0
ENSG00000240682ENST00000393292A8MVI5
ENSG00000240682ENST00000393295Q9ULR0
ENSG00000240682ENST00000485703D6RC18
ENSG00000240682ENST00000496163H0YA89

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Pathways

PathwaySourceExternal ID
SpliceosomeKEGGko03040
SpliceosomeKEGGhsa03040
Spliceosome, 35S U5-snRNPKEGGhsa_M00355
Spliceosome, 35S U5-snRNPKEGGM00355
Gene ExpressionREACTOMER-HSA-74160
Processing of Capped Intron-Containing Pre-mRNAREACTOMER-HSA-72203
mRNA SplicingREACTOMER-HSA-72172
mRNA Splicing - Major PathwayREACTOMER-HSA-72163
DNA RepairREACTOMER-HSA-73894
Nucleotide Excision RepairREACTOMER-HSA-5696398
Transcription-Coupled Nucleotide Excision Repair (TC-NER)REACTOMER-HSA-6781827
Formation of TC-NER Pre-Incision ComplexREACTOMER-HSA-6781823
Dual incision in TC-NERREACTOMER-HSA-6782135
Gap-filling DNA repair synthesis and ligation in TC-NERREACTOMER-HSA-6782210

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
161032172005The Isy1p component of the NineTeen complex interacts with the ATPase Prp16p to regulate the fidelity of pre-mRNA splicing.55

Citation

Dessen P

ISY1 (ISY1 splicing factor homolog)

Atlas Genet Cytogenet Oncol Haematol. 2015-10-01

Online version: http://atlasgeneticsoncology.org/gene/55487/isy1