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ITFG1-AS1 (ITFG1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) ITFG1-AS1
LocusID (NCBI) 101927102
Atlas_Id 64682
Location 16q12.1  [Link to chromosome band 16q12]
Location_base_pair Starts at 47144068 and ends at 47162746 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ITFG1-AS1   51383
Cards
Entrez_Gene (NCBI)ITFG1-AS1  101927102  ITFG1 antisense RNA 1
Aliases
GeneCards (Weizmann)ITFG1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:47144068-47162746 [Contig_View]  ITFG1-AS1 [Vega]
TCGA cBioPortalITFG1-AS1
AceView (NCBI)ITFG1-AS1
Genatlas (Paris)ITFG1-AS1
WikiGenes101927102
SOURCE (Princeton)ITFG1-AS1
Genetics Home Reference (NIH)ITFG1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ITFG1-AS1  -     chr16:47144068-47162746 +  16q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITFG1-AS1  -     16q12.1   [Description]    (hg19-Feb_2009)
EnsemblITFG1-AS1 - 16q12.1 [CytoView hg19]  ITFG1-AS1 - 16q12.1 [CytoView hg38]
Mapping of homologs : NCBIITFG1-AS1 [Mapview hg19]  ITFG1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BE466653 BF115500 BI462694
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITFG1-AS1
Cluster EST : UnigeneHs.634652 [ NCBI ]
CGAP (NCI)Hs.634652
Gene ExpressionITFG1-AS1 [ NCBI-GEO ]   ITFG1-AS1 [ EBI - ARRAY_EXPRESS ]   ITFG1-AS1 [ SEEK ]   ITFG1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ITFG1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927102
GTEX Portal (Tissue expression)ITFG1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ITFG1-AS1
DMDM Disease mutations101927102
Blocks (Seattle)ITFG1-AS1
Protein Interaction databases
BioGRIDITFG1-AS1
STRING (EMBL)ITFG1-AS1
ZODIACITFG1-AS1
Ontologies - Pathways
Huge Navigator ITFG1-AS1 [HugePedia]
snp3D : Map Gene to Disease101927102
BioCentury BCIQITFG1-AS1
ClinGenITFG1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927102
Clinical trialITFG1-AS1
Miscellaneous
canSAR (ICR)ITFG1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineITFG1-AS1
EVEXITFG1-AS1
GoPubMedITFG1-AS1
iHOPITFG1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:33:22 CET 2017

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