ITFG1 (integrin alpha FG-GAP repeat containing 1)

2017-11-01  

Identity

HGNC
ITFG1
LOCATION
16q12.1
LOCUSID
81533
ALIAS
2310047C21Rik,CDA08,LNKN-1,TIP
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 81533
MIM: 611803
HGNC: 30697
Ensembl: ENSG00000129636

Variants:

dbSNP: 81533
ClinVar: 81533
TCGA: ENSG00000129636
COSMIC: ITFG1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000129636ENST00000320640Q8TB96
ENSG00000129636ENST00000544001F5GXC5
ENSG00000129636ENST00000563730H3BQ64
ENSG00000129636ENST00000565262H3BUJ1
ENSG00000129636ENST00000565940I3L1X7

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
173846812007Identification of a PP2A-interacting protein that functions as a negative regulator of phosphatase activity in the ATM/ATR signaling pathway.32
283414842017RUVBL1-ITFG1 interaction is required for collective invasion in breast cancer.3

Citation

Dessen P

ITFG1 (integrin alpha FG-GAP repeat containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2017-11-01

Online version: http://atlasgeneticsoncology.org/gene/57233/itfg1